Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2696 |
Symbol | |
ID | 4023194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3011964 |
End bp | 3012554 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637962895 |
Product | polysaccharide export protein |
Protein accession | YP_569826 |
Protein GI | 91977167 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.975578 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCGTG GCCGCACCTT CGTCGTTTGT CTGTTGGGCG CGCTCGCGCT CGGCGGCTGC ATGCGACGTC CCGCTCCGGT TGCGGTCGTC CAGCCGATGG CCTATGCGCC GCCCTCTTCC GTGGCCGTGT CCCCGGACTA TCTGCTTGGC GCCGGCGACC GGCTGCGCGT GGTCGTCTAC GGCCAGGACG CGCTGACGAA TACTTACGCA ATCGACGCGT CCGGTTCGAT TGCCTTGCCG CTGATCGGCC GGGTGCCGGC GAGTGGACGC ACCGCCTCCG GTCTCGCCGG CGAGATCGCC GCGCGGTTGC GCGGCGGCTT CATTCGCGAG CCATCGGTCG CAGTGCAGAT CGAGTCCTAT CGGCCGTTCT TCATCCTCGG CGAGGTCGCC GCTCCCGGTC AGTACCCCTA TGTGCCCAAT ATGAGTGTCG AGAGCGCCGT GGCCATCGCC GGCGGTTTTA CACCGCGGGC GCAACGCGAT CGTGTCGTCC TCACTCACCC GGAGGGCGGC GCCGCGGTTC GCGCCACGGT GCCGCTCGGA ACCCCTCTCA GACCCGGCGA CACCGTCCTC GTCGGGGAGC GCTGGTTCTG A
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Protein sequence | MHRGRTFVVC LLGALALGGC MRRPAPVAVV QPMAYAPPSS VAVSPDYLLG AGDRLRVVVY GQDALTNTYA IDASGSIALP LIGRVPASGR TASGLAGEIA ARLRGGFIRE PSVAVQIESY RPFFILGEVA APGQYPYVPN MSVESAVAIA GGFTPRAQRD RVVLTHPEGG AAVRATVPLG TPLRPGDTVL VGERWF
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