Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2688 |
Symbol | |
ID | 4023185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3003143 |
End bp | 3003832 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637962886 |
Product | regulatory protein, MerR |
Protein accession | YP_569818 |
Protein GI | 91977159 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.539161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACAAAG CGCCGGATGC ATTCCGAACC ATCAGCGAAG TCGCGGACGA ACTGGACATT CCGCAGCATG TGCTGCGGTT CTGGGAGACT CGGTTCGTTC AAATCAAGCC GATGAAACGC TCGGGCGGCC GGCGCTACTA CCGGCCGGAC GACGTGGATC TGCTCAAGGG CATCCGCCGG TTGTTGTACG GCGAGGGCTA CACCATTCGC GGCGTGCAGC GCATCCTCAA GGAGCATGGC ATCAAGTCGG TGCAGCGGCT GGCCGACAAC GAAACCAGCG CCACCTTTGG CGCAGTCGAA GAAGCGATCG GCCGCACCAT CGCCGAGGAG GATGACGAAC CGTCGGCGGG CGGCGGCATC GATCTCGACG ATGACGATTA CGAGGGCGAC CATGCGGGGG CTGACCTCCA TGCGATGATG GAGGAGCCGG ACCTGCGCGC CGCGCCCGCG CCGAGCCGCG GCGGCGAAGC GCCGGCCGCG CGACGTGCTC CGGCGTTCGA GCCCGAGGAC GAGGACGATC TGCCGGCGAT GGCGGCGCCA GCGCCGCGGC TCAATCTCCC GCCGCTTGAA TTGCCGCCTG TCAATGATGC CCCGGCGCGC CCGCCGGTCG ATCTGGCGCC GCTGCGGGCC GTGTTGCACG ACCTGATCGC CTGCCGCGAG GCGCTCGACG CTGCGATCAA GGACGGCTGA
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Protein sequence | MDKAPDAFRT ISEVADELDI PQHVLRFWET RFVQIKPMKR SGGRRYYRPD DVDLLKGIRR LLYGEGYTIR GVQRILKEHG IKSVQRLADN ETSATFGAVE EAIGRTIAEE DDEPSAGGGI DLDDDDYEGD HAGADLHAMM EEPDLRAAPA PSRGGEAPAA RRAPAFEPED EDDLPAMAAP APRLNLPPLE LPPVNDAPAR PPVDLAPLRA VLHDLIACRE ALDAAIKDG
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