| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2647 |
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| Symbol | |
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| ID | 4023144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2963542 |
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| End bp | 2965830 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637962845 |
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| Product | RelA/SpoT family protein |
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| Protein accession | YP_569777 |
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| Protein GI | 91977118 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0342541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0156101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCCAG GACGCCGCAT TCCGAGGCAG ATGGAGGCCA TGGCCGATTC GGCAGCAACT
GTGGCAGGGC CAGCTTCGGC GCAGCCGAAG CCGCGTGGAA CGCGGGCCCG AATGATGCGA
CAATATGACC TCGTCGAGCG GGTCCGGAGT TACAATCCGA ATACCGACGA GGACATGCTC
AACCGCGCCT ATGTCTACGC GATGATGGCG CATGGCGAGC AGACTCGCGC CTCAGGCGAC
CCATACTTCT CGCATCCGCT CGAAGTCGCC GCGATTCTCA CCAACCTGAA GCTCGACGAC
GCGACCATCG TCGCAGCGCT GCTGCATGAC ACGATCGAAG ACACCGAGGC GACCCGGACC
GAGATCGACA AGCTGTTCGG CCATGAGATC GGCGCGCTGG TCGAGGGCCT CACCAAGCTG
AAGCGACTCG AGCTCGTGTC GCGCGAGGCC AAGCAGGCGG AGAACCTCCG CAAACTGCTG
CTGGCGATCG CCGACGACGT CCGCGTGCTG CTGATCAAGC TCGCCGATCG CCTGCACAAC
ATGCGGACGC TGGACTTCGT GCCGCCCGCA TCGCGCCAAC GGATCGCCGA GGAAACTCTC
GATATCTACG CGCCGCTCGC TGGCCGCATG GGTATGCAGG AGATGCGAGA GGAATTGGAG
GATCTGTCGT TCCGAACGCT CGATCCTGAA GCCTTCACGG TGGTGATGCA GCGGCTCGAT
GCGCTCGCCG AACGCAACCG CAACCTGATC GGCGAGATCG AAACCCAGCT CTCCGCCAAC
CTCGGCAAGA ATGGCATCAC CGCCGAGGTG ACCGGCCGGC GCAAGCGGCC GTTTTCGATC
TGGACCAAGA TGGAGCGCAA GTCGGTCGGC TTCGAGCAGC TCTCGGACAT TTACGGCTTT
CGCGTCGTGC TGAATGACGT CGAGGCCTGC TACCGCGCGC TCGGCGTGGT GCATACGACC
TGGCCGATGG TGCCGGGACG ATTCAAGGAC TACATCTCGA CGCCGAAGCA GAACGACTAT
CGCTCGCTGC ACACCACGGT GATCGGCCCG GGTCAGCAGC GCGTCGAGCT GCAGTTCCGT
ACGCAGGACA TGAACCAGAT CGCGGAATAC GGCATCGCGG CGCACGCCTT CTACAAGGAC
GGCGTCGGCT CGCCGACCGA ATTGCTCAAC CGCGAATCCA ATGCCTTCGC CTGGCTGCGT
CACACCATCG AGATGTTGTC GGAGAGTTCG AACCCGGAAG AATTCCTCGA GCATACCAAG
CTCGAACTGT TCCACGATCA GGTGTTCTGC TTCACGCCCA AGGGTAAGCT GATCGCGCTG
CCGCGCGCCG CCAACGTCAT CGACTTCGCC TATGCGGTGC ACACCGACGT CGGCAACAGT
GCGGTCGGCT GCAAGATCAA CGGCAAGTTC GCGCCGCTGT CGTCGGAGCT CCAGAACGGC
GACGAGGTCG AAGTGCTGAC GTCGAGCGTG CAATCGGCGC CGCCGGCGGC GTGGGAGTCG
CTGGCGAGAA CCGGTAAGGC GCGCGCAGCG ATCCGTCGTG CCACCCGCAC CGCGATGCGC
GATCAATATG CGGGTCTCGG CCGCCGCATC GTCGAGCGCC TGTTCGCACG CGCCAAGATC
GAATACGCCG ACGACAAGCT GAAGGGCGCG TTGCCGCGGC TGGCGCGGGC CTCGATCGAG
GACGTGATGG CCTCGGTCGG CCGTGGCGAA ATGAAAGCAT CCGACGTCGC CCGTGCGATG
TATCCCGACT ACAAGGAAGA GCGCACCGCG CGGTTCGGCG GCAAGAAGCC GGACAAACCC
GTGACGAGAT CCGCTGCGGA GCCGGGCAAG ATCGGCGCTG CGATCCCGAT CGGCGGCATC
CACTCGGGAC TGCCGGTGAA ATTCGCACCG AACGGCGGCG CCGTGCCGGG CGATCGCATT
ATCGGGATCG TCACGCCGGG CGAGGGCATC ACCATCTATC CGATCCATTC ACCGGCCTTG
AAGGATTTCG AGGAGATGCC GGAGCGCTGG CTCGACGTGA AATGGGACAT CGACGAGACC
ACGCCGCAAC GCTTCCCCGC GCGGCTGTTC TTGCAGAATG TCAACGAGCC TGGCAGCCTC
GCGCAGATCG CCAGCGTGAT CGCCGAGCAT GACGGCAATA TCGACAACAT CAATATGAGC
CGCCGCTCGC CGGACTTCAC CGAACTCACC ATCGATCTCG AGGTCTACGA CCTCAAGCAT
CTCAGTGCGA TCATCGCCCA GCTCCGCGCC AAGGCGGTCG TGGCCCACGT CGAGCGCGTC
AATGGATAG
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| Protein sequence | MAPGRRIPRQ MEAMADSAAT VAGPASAQPK PRGTRARMMR QYDLVERVRS YNPNTDEDML
NRAYVYAMMA HGEQTRASGD PYFSHPLEVA AILTNLKLDD ATIVAALLHD TIEDTEATRT
EIDKLFGHEI GALVEGLTKL KRLELVSREA KQAENLRKLL LAIADDVRVL LIKLADRLHN
MRTLDFVPPA SRQRIAEETL DIYAPLAGRM GMQEMREELE DLSFRTLDPE AFTVVMQRLD
ALAERNRNLI GEIETQLSAN LGKNGITAEV TGRRKRPFSI WTKMERKSVG FEQLSDIYGF
RVVLNDVEAC YRALGVVHTT WPMVPGRFKD YISTPKQNDY RSLHTTVIGP GQQRVELQFR
TQDMNQIAEY GIAAHAFYKD GVGSPTELLN RESNAFAWLR HTIEMLSESS NPEEFLEHTK
LELFHDQVFC FTPKGKLIAL PRAANVIDFA YAVHTDVGNS AVGCKINGKF APLSSELQNG
DEVEVLTSSV QSAPPAAWES LARTGKARAA IRRATRTAMR DQYAGLGRRI VERLFARAKI
EYADDKLKGA LPRLARASIE DVMASVGRGE MKASDVARAM YPDYKEERTA RFGGKKPDKP
VTRSAAEPGK IGAAIPIGGI HSGLPVKFAP NGGAVPGDRI IGIVTPGEGI TIYPIHSPAL
KDFEEMPERW LDVKWDIDET TPQRFPARLF LQNVNEPGSL AQIASVIAEH DGNIDNINMS
RRSPDFTELT IDLEVYDLKH LSAIIAQLRA KAVVAHVERV NG
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