Gene RPD_2641 details

Gene Information

• Locus tag: RPD_2641
• Symbol: mscL
• ID: 4023138
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris BisB5
• Kingdom: Bacteria
• Replicon accession: NC_007958
• Strand: +
• Start bp: 2959532
• End bp: 2959963
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637962839
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_569771
• Protein GI: 91977112
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 5
• Fosmid unclonability p-value: 0.00276841
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGCTCAAGG AGTTCCGCGA ATTCGCGATG AAGGGCAATG TCGTCGATCT TGCGGTCGGC 
GTCATCATCG GGGCCGCGTT CGGCGCCATC GTGACCTCGA TGGTCGGCGA TCTGATCATG 
CCGGTGATCG GCGCGGTCAC CGGCGGCCTC GACTTCTCGA ACTACTTCAC ACCGCTGTCG 
AAGGCGGTGA CGGCGAATTC GCTGGCCGAG GCGAAGAAGC AGGGCGCGGT GCTGGCGTGG 
GGCAGTTTCC TCACCATCAC GCTCAACTTC CTGATCGTCG CCGGCGTCTT GTTCGGCGTG 
ATCCGGGCGA TGAACCGGCT GAAGCGCAAC GACGAGGCCG TCGCAGCGTC GCCGCCGAAG 
CCGACCCGCG AGCAGGAACT TCTCACGGAG ATCCGCGATA TTCTGAAGAG CGGCATCCGC 
CCGCAGGTCT AG 

 

Protein sequence

MLKEFREFAM KGNVVDLAVG VIIGAAFGAI VTSMVGDLIM PVIGAVTGGL DFSNYFTPLS 
KAVTANSLAE AKKQGAVLAW GSFLTITLNF LIVAGVLFGV IRAMNRLKRN DEAVAASPPK 
PTREQELLTE IRDILKSGIR PQV