Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2640 |
Symbol | |
ID | 4023137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2958573 |
End bp | 2959463 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637962838 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_569770 |
Protein GI | 91977111 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00311988 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGCCA AGACGAATTT CCGGGGGTCG TTTACCGCCT TGGTCACGCC GTTCAAGAAC GGTTCGGTCG ACGAGCAGGC CTTTCGCGAT TTGGTCAAAT GGCAGATCGC AGCAGGGACC AACGGACTGG TGCCGGTCGG GACCACGGGC GAGAGCCCGA CGCTGAGCCA TGACGAGCAC AACAAGGTGG TGGAATGGTG CGTCGAAGAG GCCGGGGGAC GGGTGCCGGT GATCGCCGGG GCTGGATCGA ATTCCACCCG TGAGGCCATC GAGCTCGCCA GACATGCCGA GAAGGCGGGC GCGGATGCGG TCCTGGTTGT GACGCCTTAT TACAACAAGC CCACCCAGGA GGGCATGTAT CAGCACTTCA AGGCGATCAA TGACGCGATC GGGATCCCGA TCATCATCTA CAACATCCCG CCGCGATCGG TGGTCGACAT GTCGGTCGAC ACCATGTGTC GCCTGTATGA GTTGGAGAAC ATCGTCGGCG TCAAGGACGC GACGGCCAAT CTGGGCCGGG TGTCGCAGCA GCGCCACGCG ATGGGGGCGG ATTTCATCCA GCTCTCCGGC GAGGACATGA CCGCGCTGGC CTATATGGCC GCGGGCGGCC ACGGCTGCAT CTCGGTGGTG TCGAATGTGG CGCCGAAGCT CTGTGCCGAC CTGATGGCGG CGGTATTTGC CGGCGACTAT CCCGGCGCGC TGAAGATCCA GGACCGGCTG GTGCCGTTGC ACGATGCGGT CTTCAAGGAG CCCGGCGTGG CCGGCGCCAA ACATGGCTTG ACGCTGCTCG GCCGGGTTCA GGAAGAAGTG CGGCTGCCGC TGATGCCGGT GACCGAACCG ACGGGCAAAG CCATCCGCGC CGCCATGATT CACGCCGGGT TGCTGAACTA A
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Protein sequence | MAAKTNFRGS FTALVTPFKN GSVDEQAFRD LVKWQIAAGT NGLVPVGTTG ESPTLSHDEH NKVVEWCVEE AGGRVPVIAG AGSNSTREAI ELARHAEKAG ADAVLVVTPY YNKPTQEGMY QHFKAINDAI GIPIIIYNIP PRSVVDMSVD TMCRLYELEN IVGVKDATAN LGRVSQQRHA MGADFIQLSG EDMTALAYMA AGGHGCISVV SNVAPKLCAD LMAAVFAGDY PGALKIQDRL VPLHDAVFKE PGVAGAKHGL TLLGRVQEEV RLPLMPVTEP TGKAIRAAMI HAGLLN
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