| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2628 |
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| Symbol | |
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| ID | 4023125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2946539 |
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| End bp | 2947561 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637962826 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_569758 |
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| Protein GI | 91977099 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.926353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000380487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGGCCCGGC GCCGATTTCC CGGTTACCGG TCGTTTTTCC CTGACCGACG GTCCCTTCAG
CGGCCCCTCA TGATCGATAT TTTAAACCTC GCGCTACCGT ATTTCGGGCT GATCTTCGTC
GGCTTCGCCT GTGGCCGGCT GAAGCGGCTG CCGGAGAATG GCCTGGCCTG GATGAATTTT
TTCCTGCTCT ACGTGTCGCT GCCGGCGCTG TTTTTCCGGA TCATGTCGAA GACGCCGTTC
GAGGAACTCA ACAACCTGCC ATTCGTGCTG GCGACCACGC TCGGCACTGC GTGCGCGTTT
TTCGTCTCCG GGCTCATCGG GCGGGCGGTG GGCGGCCTGT CGCTGCGCGA GGCGACGATG
GCGAGCCTCG CAGGCGGTTA CGGCAATATC GGTTACATGG GTCCGGGGCT GGCGCTCGCC
GTGCTCGGAG CCAAGGCCGC GGTGCCGGTT GCGCTGATCT TCTGCTTTGA CAGCATTTTC
CTGTTCTCGA TCGTGCCGCT GGCGATGGCG CTGACCTCCG GCGAACGCCG CCCGCTGCTG
CCGACCATCG TGCATGTGGC GCGCGAGATC GTGCTGCATC CCTTGATCGT CGCCGCCTAT
TGCGGCGCTG CGGCCGCGGC GTTGCATCTG CAATTGCCGG TCGCGGTCGA CAGTACGCTG
CAGTTTCTGC AGAACGCCGC GGCCCCGGTG GCCCTGTTCA CGCTCGGGGT GACCGTGGCG
CTGCGCCCGT TCGGTCGGGT GCCGTGGGAG GTCCCCGCCA TCATCGGTGT GAAGCTGCTG
CTGCATCCGC TGATCGTGCT CGGCCTGATG CTGGCGTTCG GACCGTTCAC CCTGGAATGG
GCGGCCACCG CTGTATTGAT GGCGTCGTTG CCGCCGGCGC TCAACGTGTT CGTGATCGCC
CGGCAATACA ACACCTGGGT CGAACCGGCC TCGGTCGCGG TGCTGATCGG CACCTTCGTC
TCGGTAGTAA CCCTGACGAC GGTGATGTGG CTGATCAGGA CCGGGCAGAT GCCGCTGCTC
TAA
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| Protein sequence | MARRRFPGYR SFFPDRRSLQ RPLMIDILNL ALPYFGLIFV GFACGRLKRL PENGLAWMNF
FLLYVSLPAL FFRIMSKTPF EELNNLPFVL ATTLGTACAF FVSGLIGRAV GGLSLREATM
ASLAGGYGNI GYMGPGLALA VLGAKAAVPV ALIFCFDSIF LFSIVPLAMA LTSGERRPLL
PTIVHVAREI VLHPLIVAAY CGAAAAALHL QLPVAVDSTL QFLQNAAAPV ALFTLGVTVA
LRPFGRVPWE VPAIIGVKLL LHPLIVLGLM LAFGPFTLEW AATAVLMASL PPALNVFVIA
RQYNTWVEPA SVAVLIGTFV SVVTLTTVMW LIRTGQMPLL
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