Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2614 |
Symbol | |
ID | 4023111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2926192 |
End bp | 2927868 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637962812 |
Product | putative beta (1-6) glucans synthase |
Protein accession | YP_569744 |
Protein GI | 91977085 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG5309] Exo-beta-1,3-glucanase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.272631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00127237 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCTTGG CAGATCGCCT GCGAGCGGGT AATCGACGAG ACTTCTGGAG GACGGAACCC ATTTCTTTTC GCACGCCGCT GGCGCTTCTC CCGATTTCTC TCGGCATCAT CTTCGGCGTC TGGTGGTGGA TCGCCACGCC GGTCACCTTG GCACGCGCTC CGATCGACCC GAGCGACAAG CTCGAATGCG TCTCGTATGC GCCATTCCGC GGCGAGCAGA CGCCGCTCGA TCCGACGACG CGGATCGGCG CGGAACAGAT CGAGCAGGAT CTGACGCAAC TCGCCAAGAT CTCGAAATGC GTGCGGACCT ATTCGGTCGA CAACGGGCTT GAGCAGTTGC CGGCGATTGC CGGAAAGGTC GGGCTCAAGG TGCTTCAGGG CATCTGGCTC GGCAACGAAC GCGCCAAGAA CCTGGCGCAG ATCGCCGTCG CGGTCGGCCT GACGAAGGAT CATCCGAACG TCATCAGTTC GCTTGTGGTT GGCAACGAAG TGCTGCTGCG GGGCGAAATG ACGGCCGCAG ACCTTGCCGC GACGATTCGT CTGGTGAAGT CGCAGGTCAA GGTGCCTGTC ACCTATGCGG ATGTCTGGGA ATATTGGCTG CGCAATCGCG ATATCTACGA CGCGGTCGAC TTCGTCACGA TTCACATCCT GCCGTATTGG GAGGATCTGC CGATTCGCGC GCGCAATGCC GCGAGCCACG TCGATCAGAT CCGCAAGCGC GTCGCTGTCG CATTTCCGGC GAAGGAGATC CTGATCGGCG AGACCGGCTG GCCCAGCGCC GGGCGGATGC GCGAGGGCGC ACTGCCGTCT CGCGCCAACC AGGCGCGCGT GGTGTCGGAA ATCCTCGGCC TTGCGAAGCT CGAGAACTTC CGGGTCAATC TGATTGAAGC CTACGATCAG CCTTGGAAGC GGGAGCTCGA GGGCACCGTA GGAGGCTATT GGGGTCTGAT CGACGCCGAC AATCGTGAAC TGAAATATCC GGCTGGCCTG CCGATCAGCA ATTTCCCGCA GTGGAAGCTG TCGATGGCCG CCGGCATGGT GCTGAGCGTG TTGGTATTCG CCGCTGCGAT GCTGACGCTG CGCCGGAAAC CTTGGCCGCC GCGGCTGGTG GCGTGGCTTG CAGTGGGGGC GTCCGCGACC GCGGGCGGCG TATTGCTCGG TGTCGCCGTC GACAAGATGC TGGTCGAGAG CTACGGCTGG GGCCGATGGC TGCAATGGGG CTTGCTGCTG GCGAGCGGGG TGCTGACGCC GATCCTGGCC GCCATTGCGC TGGTGTCCGG ACGGGCGCTG CCGACTTTCC TCGAACTGTT CGGTCCGCGC GAAGATCGCA GCCGGTCGTT CCTGACCTAT GCGCTCGGTC TGTCGGTGGT GGTGACCACC CTGATCGGCG CGCAGAGCGC GCTCGGCTTC ACCTTCGATC CGCGCTATCG CGACTTCCCG TTCGCCTCGC TGACGATGGC GGTGCTGCCG CTGTTTCTGC TGATGCTGCT CAATCGGCCG CAGCAGGGCG TGCGGCCAAT CGCCGAAGCG GTGTTCGCCG GGGTGTTCGC CGTGTCCGCG CTCTACACGG TGTTCAACGA GGGGCCGAAG AACTGGCAGT CGCTGTGGAC CTGCGCGGTC TATGCGATGA TGGCGCTCAC GCTGTGGCAG GCGCGGGCCG CGCAAACCCC AAAATAA
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Protein sequence | MPLADRLRAG NRRDFWRTEP ISFRTPLALL PISLGIIFGV WWWIATPVTL ARAPIDPSDK LECVSYAPFR GEQTPLDPTT RIGAEQIEQD LTQLAKISKC VRTYSVDNGL EQLPAIAGKV GLKVLQGIWL GNERAKNLAQ IAVAVGLTKD HPNVISSLVV GNEVLLRGEM TAADLAATIR LVKSQVKVPV TYADVWEYWL RNRDIYDAVD FVTIHILPYW EDLPIRARNA ASHVDQIRKR VAVAFPAKEI LIGETGWPSA GRMREGALPS RANQARVVSE ILGLAKLENF RVNLIEAYDQ PWKRELEGTV GGYWGLIDAD NRELKYPAGL PISNFPQWKL SMAAGMVLSV LVFAAAMLTL RRKPWPPRLV AWLAVGASAT AGGVLLGVAV DKMLVESYGW GRWLQWGLLL ASGVLTPILA AIALVSGRAL PTFLELFGPR EDRSRSFLTY ALGLSVVVTT LIGAQSALGF TFDPRYRDFP FASLTMAVLP LFLLMLLNRP QQGVRPIAEA VFAGVFAVSA LYTVFNEGPK NWQSLWTCAV YAMMALTLWQ ARAAQTPK
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