| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2594 |
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| Symbol | hfq |
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| ID | 4023090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2908563 |
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| End bp | 2908811 |
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| Gene Length | 249 bp |
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| Protein Length | 82 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637962791 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_569724 |
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| Protein GI | 91977065 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.852993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0249757 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGCAG ACCGCGCACA AAACCTACAA GACACCTTCC TGAACCATGT TCGAAAAACG
AAGACTCCTC TGACGATCTT CCTGGTGAAC GGAGTCAAGT TGCAAGGCAT TGTCACCTGG
TTCGATAATT TTTGCCTGTT ACTGCGGCGC GATGGCCATT CGCAGCTGGT CTACAAGCAC
GCGATCTCGA CGATCATGCC CGGTGCGCCG ATCCAGTTGT TCGAGGGCGG CGAGGACGCA
CCAGCTTGA
|
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| Protein sequence | MAADRAQNLQ DTFLNHVRKT KTPLTIFLVN GVKLQGIVTW FDNFCLLLRR DGHSQLVYKH
AISTIMPGAP IQLFEGGEDA PA
|
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