| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2587 |
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| Symbol | |
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| ID | 4023083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2898580 |
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| End bp | 2899776 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637962784 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_569717 |
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| Protein GI | 91977058 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.439438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00531739 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGAATC CCCCCCGCAC TGCCGCCATC ATCGTCGCCG CCGGCCGCGG CCTCCGCGCA
GGCGCGGGCG GCCCCAAGCA ATACCGAACG CTGGCCGGCC GACCGGTTAT CGCACGTGCT
TTGCAGCCGT TTTGCACTCA CCCGGAGGTG TTTGCGGTCC AGCCGGTGAC TAACCCGGAC
GACACCGCGA TCTTCAACGA CGCCGTGACA GGCCTGAACT TCCGTCCCGC GGTCGGCGGC
GGCGCGACCC GACAGGGCTC GGTTCGCGCC GGGCTGGAGG CGCTGGCGGA GTTGAACCCT
GACATCGTGC TGATCCACGA CGCAGCGCGT CCCTTTGTCA CGCCCGATCT GATCTCGCGC
GCGATCGTCG CCGCAGGTCA GACCGGCGCC GCGCTGCCGG TCGTCGCGAT CAACGACACC
GTCAAGCAGA TCAACGCCGA AGGCTGCGTC GAGGCGACGC CGGACCGCGC GCGGTTGCGA
ATCGCGCAGA CCCCGCAGGC GTTCCGCTTC GACGTCATCC TCGATGCGCA TCGCCGCGCC
GCGCGCGACG GCCGCGACGA TTTCACCGAC GACGCCGCGA TCGCCGAGTG GGCAGGATTG
ACGGTCTCAA CCTTTGAAGG CGATGCTGCC AACATGAAAC TGACGACGCC GGACGATTTC
ATCCGCGAAG AGAGTCGCCT CACCGCGCTG CTCGGCGACA TCCGCACGGG CACCGGCTAC
GACGTTCACG CCTTCGGCGA CGGCGATCAC GTCTGGCTGT GCGGGCTGAA GGTGCCGCAC
AATCGCGGCT TCCTTGCGCA TTCCGATGGT GACGTCGGCT TGCACGCGCT GGTCGACGCG
ATCCTCGGCG CGCTGGCGGA CGGCGACATC GGCTCGCACT TCCCGCCGAC CGATCCGCAA
TGGAAGGGCG CGGCCTCCGA CAAGTTCTTG AAGTACGCGG TCGAGCGTGT CGCCGCGCGC
GGCGGCCGCA TCGCCAATCT CGAAGTGACG ATGATCTGCG AACGGCCGAA GATCGGCCCG
CTGCGCGAGG CGATGCGCGC CAGGATCGCC GAGATCACCG GGCTTCCCGT GTCGCGCATC
GCGGTCAAGG CCACCACCAG CGAAAGGCTC GGCTTCACCG GGCGCGAGGA AGGCATCGCC
GCCACCGCGT CCGCCACCAT CCGGCTGCCC TGGGGCGCCG AAGGACTGGC CGGCTGA
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| Protein sequence | MPNPPRTAAI IVAAGRGLRA GAGGPKQYRT LAGRPVIARA LQPFCTHPEV FAVQPVTNPD
DTAIFNDAVT GLNFRPAVGG GATRQGSVRA GLEALAELNP DIVLIHDAAR PFVTPDLISR
AIVAAGQTGA ALPVVAINDT VKQINAEGCV EATPDRARLR IAQTPQAFRF DVILDAHRRA
ARDGRDDFTD DAAIAEWAGL TVSTFEGDAA NMKLTTPDDF IREESRLTAL LGDIRTGTGY
DVHAFGDGDH VWLCGLKVPH NRGFLAHSDG DVGLHALVDA ILGALADGDI GSHFPPTDPQ
WKGAASDKFL KYAVERVAAR GGRIANLEVT MICERPKIGP LREAMRARIA EITGLPVSRI
AVKATTSERL GFTGREEGIA ATASATIRLP WGAEGLAG
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