Gene RPD_2536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2536 
Symbol 
ID4023029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2839551 
End bp2840471 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content68% 
IMG OID637962731 
Productpyruvate carboxyltransferase 
Protein accessionYP_569667 
Protein GI91977008 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA CCATCCGCAT CGTCGAGGTC GGCCCGCGCG ACGGGCTGCA GAACGAGAAG 
ATGCCGGTCG GCGTTGCGGA CCGGATCACC TTCGTCGCCG CGTTGGTCGA TGCGGGGCTC
TCGACGGTGG AAGTCGGCGC ATTCGTGTCG CCGAAGGCGG TGCCGCAGAT GGTCGGCTCC
GACGAGGTGC TGCGCGCGTC GCTCAAGCTC CCTGGCGAAT TCCACGTGCT GGTGCCGAAC
GAGAAGGGCT ACGAGGCGGC GCGGGCCGCC GGCGCCCAGG TGGTGGCGGT GTTCGCTTCC
GCGTCCGAGG GCTTCTCGCG CGCCAACATC AACTGCTCGG TCGCCGAGTC GATCGAACGC
TTCAAGCCGG TGATCGCCCG CGCGCAAGCC GATGGCGTCA GGGTGCGCGG CTACATCTCC
TGCGTGCTCG GCTGTCCGTT CGACGGCCAG GTGCCGGTGC AGGCGGTGGT CGACGCTGCG
ACCACGCTGT GGGATCTCGG CTGCTATGAG GTGTCGCTCG GCGACACCAT CGGCGTCGGC
ACGCCGACCA AAGTGCGCGA GCTGCTGCGC GCCTGCGCCG AGGCGGTGCC GATGGCATCG
CTGGCGATGC ATTTCCACGA CACTTACGGT CAGGCGCTCG CCAATTTGTA TGCCGGGCTG
GAGGAGGGCG CGCGGGTGAT CGACAGCGCC GCCGGCGGGC TCGGCGGCTG CCCCTATGCG
CCCGGCGCCA CCGGCAATGT CGCGACCGAG GACGTGGTGT ATATGCTCGA AGGCATGGGG
ATCACCACCG GCGTCGACAT GGACAAGCTC ATCGCCGCCA CCAACGGCGT TGCATCGCTG
CTCGGCCGCC CGCCGGTGAG CCGCGTCGTC AATGCGCTAA ACGCGAAGAA TAAGCGCGTC
ACTGGCACAA CGTCATCCTG A
 
Protein sequence
MSDTIRIVEV GPRDGLQNEK MPVGVADRIT FVAALVDAGL STVEVGAFVS PKAVPQMVGS 
DEVLRASLKL PGEFHVLVPN EKGYEAARAA GAQVVAVFAS ASEGFSRANI NCSVAESIER
FKPVIARAQA DGVRVRGYIS CVLGCPFDGQ VPVQAVVDAA TTLWDLGCYE VSLGDTIGVG
TPTKVRELLR ACAEAVPMAS LAMHFHDTYG QALANLYAGL EEGARVIDSA AGGLGGCPYA
PGATGNVATE DVVYMLEGMG ITTGVDMDKL IAATNGVASL LGRPPVSRVV NALNAKNKRV
TGTTSS