Gene RPD_2476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2476 
Symbol 
ID4022967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2767349 
End bp2768140 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content64% 
IMG OID637962669 
Productmolybdate transport repressor 
Protein accessionYP_569607 
Protein GI91976948 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG2005] N-terminal domain of molybdenum-binding protein
[COG3585] Molybdopterin-binding protein 
TIGRFAM ID[TIGR00637] ModE molybdate transport repressor domain
[TIGR00638] molybdenum-pterin binding domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.240008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.243533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAG ACAAGATCGA CGCATATCTG GTGCTGCGGA GCGGCGGACG CGTTCTGGTC 
GGCCGTGATC GCATCCGCCT GCTGGAGGCG GTCGCCGAAC ACGGCAGCAT CAGCAAGGCC
GCGAAGGCGA CGGGGATCAG CTACAAGACC GCGTGGGAGG CCGTCGACGC GATCAACAAT
CTGTTGCCGA CGCCTGCATT CGTGACCCGG ACCAGCGGCC GCGTCGGCGG CGCCGCCGAG
ATCACCGACG AAGGCCGGCG GCTGATTTCC GTGTTCCATC GCCTGGAAGA TCAGCTCACG
AAGATATCGT CGCTGATCGC CGAAGAAGGC CTCGAAGACA TCGGCGACGC GCTGATGTGG
GGCACCGGAT TCAAAATATC GGCGCGAAAC ATCTTCCATG CCGAGGTGCT CAGCATCCGG
CGCTGGCCGG TCGACGTCGA AGTCATCCTC AAAGTCTCGG ACGACCACGC GATTCACGCG
ATCATCACCA ATGCCGCGAC CGAGCAGCTC GGCCTCGTGC CCGGCCGCAA GGCGCTGGCG
ATTGTGAAAG CTCCGTTCGT GCGCCTTGTA TCTCCGGACG ACGCAGCGAA GCTGCGGCGC
AACCTGTTCC GTGGCTCGGT GATTCAGCGC ATCGATGCGG AAGTTCACTC CGAGGTGCAT
CTCGACCTCG GCAACGGCAA GACGCTCGTC GCAGTGGTCC AGCGTCACCA GATCGAGGAT
CTCGGTATCG TCGAAGGCTC GGAGGCCGCA GCGACGTTCG ATCCGGATCA CGTCATCATC
GCCGTCGACT GA
 
Protein sequence
MAEDKIDAYL VLRSGGRVLV GRDRIRLLEA VAEHGSISKA AKATGISYKT AWEAVDAINN 
LLPTPAFVTR TSGRVGGAAE ITDEGRRLIS VFHRLEDQLT KISSLIAEEG LEDIGDALMW
GTGFKISARN IFHAEVLSIR RWPVDVEVIL KVSDDHAIHA IITNAATEQL GLVPGRKALA
IVKAPFVRLV SPDDAAKLRR NLFRGSVIQR IDAEVHSEVH LDLGNGKTLV AVVQRHQIED
LGIVEGSEAA ATFDPDHVII AVD