| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2462 |
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| Symbol | |
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| ID | 4022953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2749236 |
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| End bp | 2750303 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637962655 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_569593 |
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| Protein GI | 91976934 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.118701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGTTCTA TTCAAGAAGA ACACGAGCGC ACCATGGCGT TTGCCGAGGT TGCGCTGAAC
CAGATTCGTG CGTTGCGGCA AGGTGCGATG CCGCGCAATT ACGAGATCTG GTACGTTTAC
GCCACCGGCT ATAATGCCGA CCTCAACAAG GCGATCAACC AGGCGCTGGC GGCTCACGGC
ACCCTGACGG ACGCCGACCT CGAGCAGTTG CACGACTGCT ATCTCTCCCA CGGCCGCACT
CACGAACGCA TCGACCGGAT CGGCGCGCGC GTCGTCAGCG AGATCGACGA CATGATGTCG
CTGCTCGCCG ATGCGCTCGG GACCACCGCA AGCTTCGGCG ACAATCTGAA GGGCGCCAGC
CAGAAGCTGT CGCTCACCAC CGACCGCGAA CAGGTCACCG CGATCGTCGA GCGGCTGGTC
GCGTCGACCC GCGAGATGCA GGATGCCAAC GCCGCGCTCG AACAGCGGCT GTCGACCTCC
AAGCAGGAAA TCACCAATCT GCAGGCCAAT CTCGAAGAGA TCCGCGCCGA GAGCCTGACC
GATCCGCTGA CCGGTCTCGG CAACCGCAAG CATTTCGACC GCGTCGTTAC CGAAGCGGTG
CGCAGCGCCG CCGCGACCCG GCTGCCGCTG TCGCTGCTGA TGATGGACAT CGATCACTTC
AAGTCGTTCA ACGACAATTA CGGCCACCTC ACCGGCGATC AGGTGCTGCG GCTGGTCGGG
ATGACCCTGA AGCAGACCAT CAAGAACAAG GACATTCCCT CGCGCTACGG CGGCGAGGAA
TTCGCCGTGG TGCTGCCGAA CACGCCGCTG CGACAGGCGC TGGTGATCGC CGACGATATC
CGCCGCACGG TGATGTCGAA GGAGCTGAAG AAGAAGTCGA CCGGCGAGAT CCTCGGCCGG
GTGACGCTGT CGGCCGGCGT GTCGACGCTG AAGCCCGAAG ACGACGCCGA CGCGCTGATC
GAACGCGCCG ACGCCTGCCT GTATTCCGCC AAGCGCAACG GCCGCAACCG GGTGATCTGC
GAAACCGACC CCGAATATCG CAGCGTGGAG CCGGCCAAGG TCGCGTAA
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| Protein sequence | MGSIQEEHER TMAFAEVALN QIRALRQGAM PRNYEIWYVY ATGYNADLNK AINQALAAHG
TLTDADLEQL HDCYLSHGRT HERIDRIGAR VVSEIDDMMS LLADALGTTA SFGDNLKGAS
QKLSLTTDRE QVTAIVERLV ASTREMQDAN AALEQRLSTS KQEITNLQAN LEEIRAESLT
DPLTGLGNRK HFDRVVTEAV RSAAATRLPL SLLMMDIDHF KSFNDNYGHL TGDQVLRLVG
MTLKQTIKNK DIPSRYGGEE FAVVLPNTPL RQALVIADDI RRTVMSKELK KKSTGEILGR
VTLSAGVSTL KPEDDADALI ERADACLYSA KRNGRNRVIC ETDPEYRSVE PAKVA
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