Gene RPD_2457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2457 
Symbol 
ID4022948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2745000 
End bp2745758 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content64% 
IMG OID637962650 
ProductFeS assembly ATPase SufC 
Protein accessionYP_569588 
Protein GI91976929 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component 
TIGRFAM ID[TIGR01978] FeS assembly ATPase SufC 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.84883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAC TGCTCGAAGT CAAGAATCTG CAAGTCAGCG TCGGCGATCG TGAGATCCTT 
CACGGGCTGA CGCTCAGCGT GAATCCCGGC GAGGTGCACG CGATCATGGG GCCGAACGGC
TCCGGCAAGT CGACGCTCAG CCACGTCATC GCCGGCAAGC CGGGCTATGA CGTCACCGGC
GGGCAGATCC TGTTCAAGGG CGAGGACCTG CTGGAGATGG CGCCGGATGT GCGCGCCGCC
AAGGGCGTGT TTCTGGCGTT CCAGTATCCG GTCGAAATTC CCGGCGTCGC CACGATGACC
TTCCTGCGCA CCGCGCTGAA CGCCCAGCGA AAGGCGCGCG GCGAAGCCGA ATTCTCGACT
CCGGATTTCC TCAAGCGGGT GCGCGAGGTC GCGGCTTCGC TGAACATTCC GCAGGAAATG
CTGAAGCGCG GCGTCAATGT CGGCTTCTCG GGCGGCGAGA AGAAGCGCAA CGAAGTGCTG
CAGATGGCGC TGTTCCAGCC GAGCCTGTGC ATCCTCGATG AAATGGATTC CGGCCTCGAC
ATCGACGCGC TGCGGGTCGC GTCCGAAGGC GTCAACGCGC TGCGCACGCC GGATCGGGCG
ATGGTGGTGA TCACCCATTA TCAGCGGCTG CTCGACTACA TCGTCCCCGA CCACGTCCAC
GTGATGTCGA AGGGCAAGGT GGTGAAGAGC GGCGGCAAGG AGCTCGCGCT CGAGCTCGAG
GCCAACGGCT ACGCGCAATA TCAGGAAGCG GCGGCTTAG
 
Protein sequence
MSALLEVKNL QVSVGDREIL HGLTLSVNPG EVHAIMGPNG SGKSTLSHVI AGKPGYDVTG 
GQILFKGEDL LEMAPDVRAA KGVFLAFQYP VEIPGVATMT FLRTALNAQR KARGEAEFST
PDFLKRVREV AASLNIPQEM LKRGVNVGFS GGEKKRNEVL QMALFQPSLC ILDEMDSGLD
IDALRVASEG VNALRTPDRA MVVITHYQRL LDYIVPDHVH VMSKGKVVKS GGKELALELE
ANGYAQYQEA AA