| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2427 |
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| Symbol | |
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| ID | 4022918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2705713 |
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| End bp | 2706384 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637962620 |
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| Product | hypothetical protein |
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| Protein accession | YP_569558 |
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| Protein GI | 91976899 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.152431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00356275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCTCCCCT GGACCAAGCT GGCCACCGCG CCGATCCCCG GCGGCGACGA ATTGCGGCTG
ATGCGGCGCG GCGACGAGTT CTCGATCAGG CTCGGCGCCA ACGAGCTGAT GAACAGCCGG
CTCGGCGGCT CCGAGGAGGC GCTGGCCACC CTCGCCTGCA AGAAGCTCGA CGGACGCAGC
CGGCCGCGCG TGCTGATCGG CGGGCTTGGC ATGGGCTTCA CGCTGCGCGC CGCGCTCGCT
GTGTTCGGCG CCGACGCCGC CATCGAGGTG GCGGAGCTGG TCCCCGAAGT GATCGACTGG
GGCCGGGGTG AAATGGCCGG CCTGTTCGGC GACAGTCTCA GCGATCCGCG CGTCAGCCTC
GTCGCACGCG ACGTCGGCGA ACTGATCCGG GACGGAGCTG GACGCTACGA CGCCATTCTG
CTCGACGTCG ACAACGGCCC TGAGGGACTT TCCCGAAAAG CCAACGACCG CTTGTACGAT
GTCGCCGGCC TCGCCGCGAC CCGCGCCTCG TTGCGCGACG GCGGCGTTCT GGCGCTGTGG
TCTTCGGGGC CGGACGACGA CTTCACCCGG CGATTGCGGC GGAGCGGCTT CGCCGTCAAC
GAAGTGCCGG TGCGCGCCGT CGGCAAGCGC GGCGGGTCCC GGCACTGGAT CTGGCTCGCC
GTGCGGAGCT GA
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| Protein sequence | MLPWTKLATA PIPGGDELRL MRRGDEFSIR LGANELMNSR LGGSEEALAT LACKKLDGRS
RPRVLIGGLG MGFTLRAALA VFGADAAIEV AELVPEVIDW GRGEMAGLFG DSLSDPRVSL
VARDVGELIR DGAGRYDAIL LDVDNGPEGL SRKANDRLYD VAGLAATRAS LRDGGVLALW
SSGPDDDFTR RLRRSGFAVN EVPVRAVGKR GGSRHWIWLA VRS
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