Gene RPD_2424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2424 
Symbol 
ID4022915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2703067 
End bp2703387 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content66% 
IMG OID637962617 
Producthypothetical protein 
Protein accessionYP_569555 
Protein GI91976896 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.717648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00305378 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTGAATT TCAAACTCGA TCGAAAGTCG TTGCGCTTCT CACCAGCCTT GTTGGCTGCG 
GCGTTCGCTA TCTCGCTGAT CTCCTTCCCG ACTCGTTCCG TTGCACGGGA TGGTGCTGCC
GTATTCGGTG CGATTGCCGG CGTCGCCGCC GCCGCGATCA TCGCGAACGG CATCGCGCAA
CAGCAGCAGC CGCGAGCCTA TCGGAGCGTG CGTCCTCGGC GGCACGTTTC GCATCGCTCG
CGCCCGGCCG CCTCGCAGGC GTCGATGGCG GATCCCTTCG CTGGCGTCGC CGCCTCGAAG
ACCCGCCCGG CGAGGGATTG A
 
Protein sequence
MLNFKLDRKS LRFSPALLAA AFAISLISFP TRSVARDGAA VFGAIAGVAA AAIIANGIAQ 
QQQPRAYRSV RPRRHVSHRS RPAASQASMA DPFAGVAASK TRPARD