| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2423 |
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| Symbol | |
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| ID | 4022914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2701740 |
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| End bp | 2702906 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637962616 |
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| Product | peptidase S1 and S6, chymotrypsin/Hap |
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| Protein accession | YP_569554 |
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| Protein GI | 91976895 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00407497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGGAGCTC TGATCGCCGT CCTCTCACTT GCATTGATGC CGGCGGCTCG CTCCGAAGAC
GGTCTGAACA TCGACAAATC ATTCGGATCG GTCTCGGGTT GGGACGTTGG GTTCAGCAAG
AACGTCGGTG GCTGTCTGGC CGCAGCGACC TATCGCGACC GGACGACGGT GTGGTTCGGC
TTTGCCGGAG ACAAGCCGAG CGCCTACATC GCCTTCACCA ACCCGCGCTG GGCGTCCGTC
GAGGTCGATG GCCAGTACGA CCTGCAACTG GTCATGCGCC GCACGCGGTG GAACGGTCAG
TTCGTCGGCT TCACGCGCGG TAACGAGAGG GGCGTTTTCT CTGCCGGTCT CAAGACCGAG
TTCATGGTCG AACTGGCCGA GTCCGGCGGT GTGGGTGTGT TCCTGAATCG AAATCGCATC
GCGGCGCTTT CCCTCGACGG CTCCCGGCGC GCCCTCGAAG CGGTGCTGTC TTGCCAGAAG
GCATTCATGA CGGCCCAGAG CGACACACGC GACGAAGGTT CGACCGGGGC CAAGCCAAAG
CGCAACGCCA GGAGTTCAGG CACGGGATTC TACGTCTCCG GGAACGGGCA CATCGTGACC
AACAACCACG TCATCGCCGA ATGCTCGGCG ATCAATGTGA TTCCCCCCGG CGGGGCGCCG
TTGCGCGCGA CTCTCGTGGC GAAGGACAAG ACCAACGATC TCGCGATTCT GAAGACGTCG
TCGTCGCCGC CCGCTGTTCC TGGACTCAGA ACCCAGATGC GGTTGGGCGA AGCCGTGTAC
GTGTTCGGCT TTCCTCTGAC TGGCATCCTG TCGACATCAG GAAACTTCAC GGCCGGCGCG
ATCACCGCGA CCACCGGCAT GGAAGACGAC ACCCGCCTCG CCCAGATCTC CGCTCCGGTT
CAACCGGGCA ACAGCGGCGG TCCGTTGCTC GACAAATACG GCAACGTTGT CGGCGTGATC
GTATCGAAGC TCAACGCCTT GAACATCGCC GCCGCGACCA AAGACATTCC GCAGAACGTC
AATTTCGCGA TCAAATCCGG CATCGCGACG AACTTCCTCG ACAGCAGCGG CGTGCTCCCC
AGCGGCACGG TGAGCACGCG CGAACTCCCG CCGGAGGCGA TCGCCGATCT GGCCAAATCC
TTCACGGTCC AGGTGCTCTG TAATTAG
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| Protein sequence | MGALIAVLSL ALMPAARSED GLNIDKSFGS VSGWDVGFSK NVGGCLAAAT YRDRTTVWFG
FAGDKPSAYI AFTNPRWASV EVDGQYDLQL VMRRTRWNGQ FVGFTRGNER GVFSAGLKTE
FMVELAESGG VGVFLNRNRI AALSLDGSRR ALEAVLSCQK AFMTAQSDTR DEGSTGAKPK
RNARSSGTGF YVSGNGHIVT NNHVIAECSA INVIPPGGAP LRATLVAKDK TNDLAILKTS
SSPPAVPGLR TQMRLGEAVY VFGFPLTGIL STSGNFTAGA ITATTGMEDD TRLAQISAPV
QPGNSGGPLL DKYGNVVGVI VSKLNALNIA AATKDIPQNV NFAIKSGIAT NFLDSSGVLP
SGTVSTRELP PEAIADLAKS FTVQVLCN
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