Gene RPD_2422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2422 
Symbol 
ID4022913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2700668 
End bp2701618 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content71% 
IMG OID637962615 
Producthypothetical protein 
Protein accessionYP_569553 
Protein GI91976894 
COG category[S] Function unknown 
COG ID[COG4765] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0248233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGAA GCCTCTGTTT TGTCGGTCTT GCGGCGCTGA TCGCCGCTCC GTTGATCACG 
CTCGCGCTGC CCGCGCAGGC GCAGATCGGC AATATTTTTT CCGACCCGGC GCCGCGTCCG
CCCGGAGCGA TCCCGCGTGG CGGGCTGCCG ATGGAAGATG AGGAAGAGGT ACCGGACCTG
CCGCCGCAAG GCCGCGTGCT ACCCGCGCCG ACTCGCCCGC CGCAAGGCTC GGCGTTGCCC
GGTCCGGTCC AATCGCAGCC GTTGCCGCCG CCGCCGGGCA CCACCATCAT TCCGCAGAAC
CCGCCAGCGA CCGCCAACGT GCCGCCGGCC GCTGCTCCGC AGCCGGGGGG TGCGCCGGCC
CAGCCCAACA ACGGCGTCGC CGCCGCGCCG CCGGGCGGCA ATCCGCTGCC GGGACTGGCT
CCCGGCCAGC GTCAGCCCCG CGGCGCGCCG CCCGCGCCCG CGACGCTGCA GCCCGGCGAC
GAAATCGTCA CCGAGCCGCC GGCGCAGAAG ATCGTCAACA AGAAGGCCAG CTTCACCGGC
CTCGACAAGA TCACCGGCCG CACCATCAGC TTCGATGCCG ATATCGGCGA AACCGTGCAA
TTCGGCGCGC TGCGGGTGAA GACCGACGCC TGCTATACGC GCCCCTCGAC CGAGGCCGCC
AACACCGACG CCTTCGTCGA GGTCGACGAG ATCACGCTGC AGGGCGAAGT GAAGCGGATT
TATTCAGGCT GGATGTTCGC CGCGAGCCCG GGTTTGCACG CGGTCGAGCA CCCGATCTAC
GATATCTGGC TGACCGACTG TAAGAACCCC GAAACGACTG TGGTCAACGC CCAGCCCGAG
GCGCCGAAGC CGGTCGCCGC GCCGCCGCAG CGTCGCCGGC AGCCGCCGCC GCAACAACCG
CGTCAGCCAG CCCCGGCACC GCCTCCGCCG CAGTTTCCGC AGTTCAGGTA G
 
Protein sequence
MSRSLCFVGL AALIAAPLIT LALPAQAQIG NIFSDPAPRP PGAIPRGGLP MEDEEEVPDL 
PPQGRVLPAP TRPPQGSALP GPVQSQPLPP PPGTTIIPQN PPATANVPPA AAPQPGGAPA
QPNNGVAAAP PGGNPLPGLA PGQRQPRGAP PAPATLQPGD EIVTEPPAQK IVNKKASFTG
LDKITGRTIS FDADIGETVQ FGALRVKTDA CYTRPSTEAA NTDAFVEVDE ITLQGEVKRI
YSGWMFAASP GLHAVEHPIY DIWLTDCKNP ETTVVNAQPE APKPVAAPPQ RRRQPPPQQP
RQPAPAPPPP QFPQFR