Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2402 |
Symbol | |
ID | 4022891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2674682 |
End bp | 2676970 |
Gene Length | 2289 bp |
Protein Length | 762 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637962593 |
Product | ATP-binding region, ATPase-like |
Protein accession | YP_569533 |
Protein GI | 91976874 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0299776 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGCGG CTGCTGGTGA CGTCGATCTG ACGAACTGCG ACCGGGAGCC GATCCACATT CCGGGCTGCA TCCAGCCTCA CGGATTGCTG ATCGCGTTCA ACGACGAATT GAAGGTTGTC GCCGTCAGTT CGAACATTGG AAACTTCGTC GACCTCGAAC CAGGCGAGCT GCTGGGCCAA TCGCTCGACA AGGCGCTCGA CTCCGACAGC CATATGCGCT TGCGCAAAGC GATGCGAGAG CCCGTCGATG CGAGCGGATC ACCGATCGCA ATCCGCCTGC ATGGTCACGA CGCAGAATTC ACCGGCCTTT GGCACCGCCA CGGGGGACTA GCTTTCCTGG AACTCGAAGT CCCGCTGCAC GAGGCGGCCG AGTCGCACGC GTTCTTCTGC CGGACCAGCG GCGCGATCAA GCGACTGCAG GCGGCGCAGA CCCTGCAGGG CGCCTGCGCC GCGGCGGCCT GCGAAGTGCG GGAGATCACC GAATTCGATC GCGTCAAAAT TTATCGCTTC GCTTCCGACT ACAGCGGCGA GGTCATCGCA GAGGACCGCG CCGAAGGGGT CGAGTCGTTC CTCGGTCTGC GTTTTCCGCC GTCGGATATT CCAGTGCAGG CGCGCCGGCT CTACACGATC AATCCGATCC GCATCATTCC CGATATCGAC TACATCCCGG TGCCGATCGT GCCCGGCACC GATCCGTCGA CCGGGCAGGC CATCGATCTG ACGTTTTCGG TGCTGCGCAG CGTGTCGCCG GTTCATCTCG AATACATGCG CAATATTGGA ATGCGGGGCA CGATGTCGGT CTCGATCCTC CGCGGCGACA GGCTGTGGGG ACTGATCGCC TGTCACAACC GGCAGCCGAG ATATGTCGGG CACGACGCCC GGCAGGCCTG TGAGATGGTG GCGCAGGTGC TGGCCTGGCA GGTCGGCGTG ATGGAGGAGC AGGCGGCGAC CCGCCAAACC TTGAAGGGCA AGGCGATCCA ACGCAGCCTG ATCAGCGACA TCGAGCAATT GCACGACCAT CGTGCCGGCC TGATCCGGAA TAGCGAGGCA CTGCTCGACA TGATGGGCGC GTCGGGCCTG TGTCTGTTCG GGCGCGAAGG CATCACCGCG ATCGGCAGCA CCCCGCCTGA ATCGGCGATC GAGAAGGTTG CCAGCCTGGT CGGGCGCAAC GACAGCACCG AGTTGTTCGA AACCGATCAA CTGTCGACCC TGTTTCCGGA GGCCAAAGCT TTCGCCGACG TCGCGAGCGG GGTGCTGGCG GTGCCGCTGT CGCGGACGAC GCCGCGTCGC GTGATGTTGT GGTTTCGGCC AGAAGTCGCG CAGACGGTGC ATTGGGCCGG CAACCCCGAC AAATCGGTCA CAACCGAGGC TGGCCGGCTG CGGCCACGCA CGTCGTTCGC CGCGTGGACC GAGGAAACCA GTGGCCGCGC ACTCCCTTGG CAGCCGCACG AGATCGCCGC GGCCGTTGAA ATAAGGGACC TCGTCATCGA CGTCATCCTG CGCAACACCG AGAAGCTCGA ACGCGTGAAT ACCAAGCTCG CGCGCAGTAA TGAGGAACTC GAGGCCTTCG CCAATGTCGC CTCGCACGAC ATCAAGGAGC CGTTGCGCCA TATCGAAGCC TTCGCCGGCC TGCTCGGCGA GTCGATCCGC GAGATGGGCG ACGAACGACT CGGCCTGATG GTCAGCGGAA TCGAGAAATC ATCTCAGCGG CTGCGAATTC TGATCAACGA TCTCGCCGAA TTCTCACAGC TCGGGCGCCG CTCCAAACCG CTCACGCAAA CCTCGCTTCT GGAAGTCGCG CAGGAAGTCG TGACCGATCT TCATCAGCGG ATCGACGAGG CGTCAGCGAT CGTCGAGATC GGTGATCTGC CAGTCGCGCG TTGCGATCGC AACCAGATGC GCCAGGTGCT GCAGAACCTT GTGTCGAACG CCTTGAAGTA CCGACGACCC GGTCGCCCTT GCCGAATCCG CGTGTTCGCA GAATCGCGGA CCGAGCCGAG GCCGCGAGGG GAGGTGGGGG ATTCAACGAT CAGTACCCGA GTCTGTGTCA GCGACAACGG CATCGGCTTC GATCCCAAAT ATGCCGAGCA GATCTTCGAA CCGTTTCAGC GGCTGCACGG CCCCGACGAA TATGAAGGCA GCGGCATCGG GCTCGCGATC TGCCGCAAGA TCGTGCAGCG GCACGGTGGC CGGGTGGGCG TCGACACCAT TCCGGGCTCG GGGTCGACGT TCTGGTTCAC CCTGCCGATC GCGGCCGATC CATCCGCCGA ACCGAACAGG GGATCGTGA
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Protein sequence | MHAAAGDVDL TNCDREPIHI PGCIQPHGLL IAFNDELKVV AVSSNIGNFV DLEPGELLGQ SLDKALDSDS HMRLRKAMRE PVDASGSPIA IRLHGHDAEF TGLWHRHGGL AFLELEVPLH EAAESHAFFC RTSGAIKRLQ AAQTLQGACA AAACEVREIT EFDRVKIYRF ASDYSGEVIA EDRAEGVESF LGLRFPPSDI PVQARRLYTI NPIRIIPDID YIPVPIVPGT DPSTGQAIDL TFSVLRSVSP VHLEYMRNIG MRGTMSVSIL RGDRLWGLIA CHNRQPRYVG HDARQACEMV AQVLAWQVGV MEEQAATRQT LKGKAIQRSL ISDIEQLHDH RAGLIRNSEA LLDMMGASGL CLFGREGITA IGSTPPESAI EKVASLVGRN DSTELFETDQ LSTLFPEAKA FADVASGVLA VPLSRTTPRR VMLWFRPEVA QTVHWAGNPD KSVTTEAGRL RPRTSFAAWT EETSGRALPW QPHEIAAAVE IRDLVIDVIL RNTEKLERVN TKLARSNEEL EAFANVASHD IKEPLRHIEA FAGLLGESIR EMGDERLGLM VSGIEKSSQR LRILINDLAE FSQLGRRSKP LTQTSLLEVA QEVVTDLHQR IDEASAIVEI GDLPVARCDR NQMRQVLQNL VSNALKYRRP GRPCRIRVFA ESRTEPRPRG EVGDSTISTR VCVSDNGIGF DPKYAEQIFE PFQRLHGPDE YEGSGIGLAI CRKIVQRHGG RVGVDTIPGS GSTFWFTLPI AADPSAEPNR GS
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