Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2397 |
Symbol | |
ID | 4022886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2670638 |
End bp | 2671300 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637962588 |
Product | hypothetical protein |
Protein accession | YP_569528 |
Protein GI | 91976869 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.438725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.127627 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAAA TCATCACCCG GTTGTACGAT TCCAGCAGCA AGCTCGCTGC GCTGGAAGCC GACCTGAAGA AGAACAACTA CAAATATTCC GTCGTCACCG GCTATCAGGC CGGCAAGGCG AGTTCCACCG ACGACATCGC CGCCGCTCTG GGCAGGGCCT ATGTGTCGCG CGGCGACGCC CGGACCTATG CGGACTACGT CAAGAAGGGC GCCGTCGTGG TCGCCGTGCA GGCCGAGTTC GGCTTCGCCG CCAAGGCCAC GACGATCCTC GACAGCTACG GCCCGAACAA GATCAGCATG CAATCATCGT CGTCGGCCGG CTTGGAAATG AGCGAGGCGA CGCCGTTTTC GAACATGATT CATGCCAAGG CACTGCTCGA CACCTCGGGC AAGTACAAAT CCTATTCCGG CGACTGGCTG CTCGTCGACA GCGACAAGAC CTTTTCTGGT ACGCCGCTCG TCATCAGCAG CAAGGGCCCG TATCAGTCGT TTTCCGGAAC ACCGTTGCTG CTCGACAGCA GCGGTCCCTA CAAGTCCTTC TCCGGGACTC CCGTGTTGCT GGACAGCAGC GGTCCGTACA AATCCTATTC GGGCGAGCCG CTACTGATCA ACAAACCGAC CATCTTCTCC TCCTGGCTGG GCCTGCCAGT GCTCTCTAAG TAA
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Protein sequence | MTQIITRLYD SSSKLAALEA DLKKNNYKYS VVTGYQAGKA SSTDDIAAAL GRAYVSRGDA RTYADYVKKG AVVVAVQAEF GFAAKATTIL DSYGPNKISM QSSSSAGLEM SEATPFSNMI HAKALLDTSG KYKSYSGDWL LVDSDKTFSG TPLVISSKGP YQSFSGTPLL LDSSGPYKSF SGTPVLLDSS GPYKSYSGEP LLINKPTIFS SWLGLPVLSK
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