Gene RPD_2397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2397 
Symbol 
ID4022886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2670638 
End bp2671300 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content60% 
IMG OID637962588 
Producthypothetical protein 
Protein accessionYP_569528 
Protein GI91976869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.438725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.127627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAA TCATCACCCG GTTGTACGAT TCCAGCAGCA AGCTCGCTGC GCTGGAAGCC 
GACCTGAAGA AGAACAACTA CAAATATTCC GTCGTCACCG GCTATCAGGC CGGCAAGGCG
AGTTCCACCG ACGACATCGC CGCCGCTCTG GGCAGGGCCT ATGTGTCGCG CGGCGACGCC
CGGACCTATG CGGACTACGT CAAGAAGGGC GCCGTCGTGG TCGCCGTGCA GGCCGAGTTC
GGCTTCGCCG CCAAGGCCAC GACGATCCTC GACAGCTACG GCCCGAACAA GATCAGCATG
CAATCATCGT CGTCGGCCGG CTTGGAAATG AGCGAGGCGA CGCCGTTTTC GAACATGATT
CATGCCAAGG CACTGCTCGA CACCTCGGGC AAGTACAAAT CCTATTCCGG CGACTGGCTG
CTCGTCGACA GCGACAAGAC CTTTTCTGGT ACGCCGCTCG TCATCAGCAG CAAGGGCCCG
TATCAGTCGT TTTCCGGAAC ACCGTTGCTG CTCGACAGCA GCGGTCCCTA CAAGTCCTTC
TCCGGGACTC CCGTGTTGCT GGACAGCAGC GGTCCGTACA AATCCTATTC GGGCGAGCCG
CTACTGATCA ACAAACCGAC CATCTTCTCC TCCTGGCTGG GCCTGCCAGT GCTCTCTAAG
TAA
 
Protein sequence
MTQIITRLYD SSSKLAALEA DLKKNNYKYS VVTGYQAGKA SSTDDIAAAL GRAYVSRGDA 
RTYADYVKKG AVVVAVQAEF GFAAKATTIL DSYGPNKISM QSSSSAGLEM SEATPFSNMI
HAKALLDTSG KYKSYSGDWL LVDSDKTFSG TPLVISSKGP YQSFSGTPLL LDSSGPYKSF
SGTPVLLDSS GPYKSYSGEP LLINKPTIFS SWLGLPVLSK