Gene RPD_2368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2368 
Symbol 
ID4022857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2642910 
End bp2644952 
Gene Length2043 bp 
Protein Length680 aa 
Translation table11 
GC content67% 
IMG OID637962561 
Product5-oxoprolinase (ATP-hydrolyzing) 
Protein accessionYP_569501 
Protein GI91976842 
COG category[E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.773275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACGA TTGGAATCGA TGTCGGCGGC ACCTACACCG ACCTGGTCGC GATCGATCGC 
GAAGGCAAGA CCGTGTTCGC GAAGTCGCCG TCCACGCCGT CGGATCAGTC GATCGGCGTG
ATGACGGGGC TCGACGAGCT GGCGCGCCGG CTCGGCCTGT CGCGCGCGGA CATGCTCGGC
CAGACCGATC GCCTGGTGCA TGGCACGACG GTTGCCACCA ACGCGCTGCT CGAGCGAAAG
GGCGCAAAGG TCGCATTGCT GACGACGCAG GGACATCGCG ACATTCTCGA AATGCGCGAG
GGCCTGAAGG GCGATCGCTA CAATCTTCGG ACGGCGCCGC CGGAGCCGCT GGTGCCGCGA
GAACTGCGCT TCGGCGTGCG CGAACGCGTC AAGCCGGATG GATCGGTGCT GGTCCCGCTC
GACCAGGACT CGCTCGGCGA GGCGATCGCC GCGGTCCGCG CATCAGGCGT GACGTCGGTG
GCGGTTTGCT TCCTTCATGC CTACCGCAAT CCCGCTCATG AGATCGCAGC GGCGGAACGG
TTGCGGCGCG AGTTGCCGGA GGTCGGCGTC TCGCGGTCGA GCGACGTGCT GCCGCAGATC
AAGGAATACG AGCGCATCTC GACGACCATC GTCAACGCCT ATGTCGAGCC GGCGGTGCGG
CGCTATCTCA CCAATCTGGA GGCGCGGCTG AAGCAAGCCG GCCTCGCCAG CGGTCTGTTC
ATCATCCTGT CCCATGGCGG CATGGCCCCC GTCGAGGAAG CCGCGCGTCT CGCGGCCGGT
ACGGTGCTGT CCGGTCCCGC CGGTGGCATT TCGGGCTGCC GCCGCTGCGC CGACCTGCTC
GGCAGTCCCA ATCTCGTTGC GTTCGATATG GGCGGCACCA GCACTGATAT TTCGCTGATC
ACCGATGGTC GGGCTTCGCT TTCCGCCGAT GGCGGGCTTG CCGATCAACG GATCGCGTTG
CGCAGTCTCG ACATCACCAG CATCGCCGCA GGCGGCGGCT CGATTGCGGC GATCGATGCG
GGCGGCACCT TCCGGGTCGG TCCGGAAAGC GCAGGCTCCG TGCCTGGACC GGCCTGCTAT
GGCAATGGCG GAATCGAGGC GACGGTGACG GACGCCAATG TCATTCTCGG CTACCTCGAC
GCGGCGGCGT TCATGGGCGG CAAGCGGCCG CTGGATCGTG CGGCGTCCGA GGCGGCCGTC
GACCGGCTGG CCCGGTCGCT CGACCTGTCG CGCGATGAGG CCGCCGCCGG CATCTATCGC
ATGGTCAATC TGCGGATGGC CGACGGGATC CGTCTGATGA CCCTGCGCCG CGGCGTCGAT
CCGCGCCGCT ACGCGCTCCT GAGCTTCGGC GGGGCCGCCG GTCTTCATGC GGCAGAGGTG
GCGCGCGAGC TGGAGATCAA GCGCATCATC GTGCCGACCG CCGCATCGGT GCTGTCGGCC
TGGGGGATGC TGACGAGCGA CCTGCGTTAC GAGGTCAGCA GCACGCATTA CAGCGCGGGC
CAACGCATCA CGCCGGCGGA AGTGCGGGCG ATCTTCTCCG ATCTCGAACA GCAGGCGACC
GGGCGGCTGA CATCCTGGTT CGGCGGCGAG GTCGCGATCG AGCGCTCCGC CGAGATGCGC
TATGGCGAGC AGATCTTCGA GATCGACGTT GCGCTGAACG ATCTCGACTG GACGTCGGAC
GACATCGTCG ATCGTATCGA GGAGTTGTTC CATCGCCGGC ACGAAGAGCT CTACACCTAT
GCGTCGCCGG ATCAGGAAGT CGTCTTCGTC AATGCCCGCG TCGCCGCGAT CGGCGTGATT
CCGCAAGGCG CCGATGTTGC CCGCGACGAC GCTGTCGCAA CCGCCTGTGC GCCATCAGGC
AAACGCAAGG CGTTTTTCGG GGCATGGCGG GACGTGCCGG TCTATGCGGC GGACAGGCTG
AAGCCGGGTC ATGTCATCCC AGGGCCCGCG ATCGTCGAGG CGGAAACCAC GACAGTTGTG
ATCAATGACG GCGATCGGAT CACGGTCAAC GATCTCGGCT GGCTCGATAT CGCGCTGGCA
TAG
 
Protein sequence
MFTIGIDVGG TYTDLVAIDR EGKTVFAKSP STPSDQSIGV MTGLDELARR LGLSRADMLG 
QTDRLVHGTT VATNALLERK GAKVALLTTQ GHRDILEMRE GLKGDRYNLR TAPPEPLVPR
ELRFGVRERV KPDGSVLVPL DQDSLGEAIA AVRASGVTSV AVCFLHAYRN PAHEIAAAER
LRRELPEVGV SRSSDVLPQI KEYERISTTI VNAYVEPAVR RYLTNLEARL KQAGLASGLF
IILSHGGMAP VEEAARLAAG TVLSGPAGGI SGCRRCADLL GSPNLVAFDM GGTSTDISLI
TDGRASLSAD GGLADQRIAL RSLDITSIAA GGGSIAAIDA GGTFRVGPES AGSVPGPACY
GNGGIEATVT DANVILGYLD AAAFMGGKRP LDRAASEAAV DRLARSLDLS RDEAAAGIYR
MVNLRMADGI RLMTLRRGVD PRRYALLSFG GAAGLHAAEV ARELEIKRII VPTAASVLSA
WGMLTSDLRY EVSSTHYSAG QRITPAEVRA IFSDLEQQAT GRLTSWFGGE VAIERSAEMR
YGEQIFEIDV ALNDLDWTSD DIVDRIEELF HRRHEELYTY ASPDQEVVFV NARVAAIGVI
PQGADVARDD AVATACAPSG KRKAFFGAWR DVPVYAADRL KPGHVIPGPA IVEAETTTVV
INDGDRITVN DLGWLDIALA