Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2368 |
Symbol | |
ID | 4022857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2642910 |
End bp | 2644952 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637962561 |
Product | 5-oxoprolinase (ATP-hydrolyzing) |
Protein accession | YP_569501 |
Protein GI | 91976842 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.773275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTACGA TTGGAATCGA TGTCGGCGGC ACCTACACCG ACCTGGTCGC GATCGATCGC GAAGGCAAGA CCGTGTTCGC GAAGTCGCCG TCCACGCCGT CGGATCAGTC GATCGGCGTG ATGACGGGGC TCGACGAGCT GGCGCGCCGG CTCGGCCTGT CGCGCGCGGA CATGCTCGGC CAGACCGATC GCCTGGTGCA TGGCACGACG GTTGCCACCA ACGCGCTGCT CGAGCGAAAG GGCGCAAAGG TCGCATTGCT GACGACGCAG GGACATCGCG ACATTCTCGA AATGCGCGAG GGCCTGAAGG GCGATCGCTA CAATCTTCGG ACGGCGCCGC CGGAGCCGCT GGTGCCGCGA GAACTGCGCT TCGGCGTGCG CGAACGCGTC AAGCCGGATG GATCGGTGCT GGTCCCGCTC GACCAGGACT CGCTCGGCGA GGCGATCGCC GCGGTCCGCG CATCAGGCGT GACGTCGGTG GCGGTTTGCT TCCTTCATGC CTACCGCAAT CCCGCTCATG AGATCGCAGC GGCGGAACGG TTGCGGCGCG AGTTGCCGGA GGTCGGCGTC TCGCGGTCGA GCGACGTGCT GCCGCAGATC AAGGAATACG AGCGCATCTC GACGACCATC GTCAACGCCT ATGTCGAGCC GGCGGTGCGG CGCTATCTCA CCAATCTGGA GGCGCGGCTG AAGCAAGCCG GCCTCGCCAG CGGTCTGTTC ATCATCCTGT CCCATGGCGG CATGGCCCCC GTCGAGGAAG CCGCGCGTCT CGCGGCCGGT ACGGTGCTGT CCGGTCCCGC CGGTGGCATT TCGGGCTGCC GCCGCTGCGC CGACCTGCTC GGCAGTCCCA ATCTCGTTGC GTTCGATATG GGCGGCACCA GCACTGATAT TTCGCTGATC ACCGATGGTC GGGCTTCGCT TTCCGCCGAT GGCGGGCTTG CCGATCAACG GATCGCGTTG CGCAGTCTCG ACATCACCAG CATCGCCGCA GGCGGCGGCT CGATTGCGGC GATCGATGCG GGCGGCACCT TCCGGGTCGG TCCGGAAAGC GCAGGCTCCG TGCCTGGACC GGCCTGCTAT GGCAATGGCG GAATCGAGGC GACGGTGACG GACGCCAATG TCATTCTCGG CTACCTCGAC GCGGCGGCGT TCATGGGCGG CAAGCGGCCG CTGGATCGTG CGGCGTCCGA GGCGGCCGTC GACCGGCTGG CCCGGTCGCT CGACCTGTCG CGCGATGAGG CCGCCGCCGG CATCTATCGC ATGGTCAATC TGCGGATGGC CGACGGGATC CGTCTGATGA CCCTGCGCCG CGGCGTCGAT CCGCGCCGCT ACGCGCTCCT GAGCTTCGGC GGGGCCGCCG GTCTTCATGC GGCAGAGGTG GCGCGCGAGC TGGAGATCAA GCGCATCATC GTGCCGACCG CCGCATCGGT GCTGTCGGCC TGGGGGATGC TGACGAGCGA CCTGCGTTAC GAGGTCAGCA GCACGCATTA CAGCGCGGGC CAACGCATCA CGCCGGCGGA AGTGCGGGCG ATCTTCTCCG ATCTCGAACA GCAGGCGACC GGGCGGCTGA CATCCTGGTT CGGCGGCGAG GTCGCGATCG AGCGCTCCGC CGAGATGCGC TATGGCGAGC AGATCTTCGA GATCGACGTT GCGCTGAACG ATCTCGACTG GACGTCGGAC GACATCGTCG ATCGTATCGA GGAGTTGTTC CATCGCCGGC ACGAAGAGCT CTACACCTAT GCGTCGCCGG ATCAGGAAGT CGTCTTCGTC AATGCCCGCG TCGCCGCGAT CGGCGTGATT CCGCAAGGCG CCGATGTTGC CCGCGACGAC GCTGTCGCAA CCGCCTGTGC GCCATCAGGC AAACGCAAGG CGTTTTTCGG GGCATGGCGG GACGTGCCGG TCTATGCGGC GGACAGGCTG AAGCCGGGTC ATGTCATCCC AGGGCCCGCG ATCGTCGAGG CGGAAACCAC GACAGTTGTG ATCAATGACG GCGATCGGAT CACGGTCAAC GATCTCGGCT GGCTCGATAT CGCGCTGGCA TAG
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Protein sequence | MFTIGIDVGG TYTDLVAIDR EGKTVFAKSP STPSDQSIGV MTGLDELARR LGLSRADMLG QTDRLVHGTT VATNALLERK GAKVALLTTQ GHRDILEMRE GLKGDRYNLR TAPPEPLVPR ELRFGVRERV KPDGSVLVPL DQDSLGEAIA AVRASGVTSV AVCFLHAYRN PAHEIAAAER LRRELPEVGV SRSSDVLPQI KEYERISTTI VNAYVEPAVR RYLTNLEARL KQAGLASGLF IILSHGGMAP VEEAARLAAG TVLSGPAGGI SGCRRCADLL GSPNLVAFDM GGTSTDISLI TDGRASLSAD GGLADQRIAL RSLDITSIAA GGGSIAAIDA GGTFRVGPES AGSVPGPACY GNGGIEATVT DANVILGYLD AAAFMGGKRP LDRAASEAAV DRLARSLDLS RDEAAAGIYR MVNLRMADGI RLMTLRRGVD PRRYALLSFG GAAGLHAAEV ARELEIKRII VPTAASVLSA WGMLTSDLRY EVSSTHYSAG QRITPAEVRA IFSDLEQQAT GRLTSWFGGE VAIERSAEMR YGEQIFEIDV ALNDLDWTSD DIVDRIEELF HRRHEELYTY ASPDQEVVFV NARVAAIGVI PQGADVARDD AVATACAPSG KRKAFFGAWR DVPVYAADRL KPGHVIPGPA IVEAETTTVV INDGDRITVN DLGWLDIALA
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