| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2354 |
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| Symbol | |
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| ID | 4022843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2628950 |
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| End bp | 2631286 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637962547 |
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| Product | TonB-dependent haem/haemoglobin receptor |
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| Protein accession | YP_569487 |
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| Protein GI | 91976828 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.548378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGGGC TGAACTCGCG CATCTGTGCG CTGTTGCTAT CCGTATCCGT TATCGCGCTG
GCGGCGTCGC CGAGCGCGGC GCAAACCGCG GTGCTGTCGC CGCAATCCAA AAAGCAGAAG
CCGGTCACGC TCGACCAAGT AGCAAAGCCG GCGCTACAGA TGCCGGCGAC TGACCCGCTC
GACGCCTATG CGCAAGCTGG TCCATCGACC CAGTCGCTCG ATGCGATCAC CGTGGTTTCC
ACCAAGAACG AAGAGCGCGC GATCGACGCG CTGGCGCCGG CGAGCGCGAT CACTGTCGAC
CAGATCCAGC GGCTTCAGCC GAACCGGCTG CAGGACATCT TCGTCGCCAC GCCGGGCGTA
TCGTTCCAGG ATCGCGGCGA CGATCCGTCG ACCGCGATCA ACATCCGCGG TCTGCAGGAT
TTCGGCCGGG TCGGCGTCGT GGTCGACGGT GCGCGGCAGA ACTATCAGCG CTCCGGCCAC
AATGCGCAGG GCTCGCTCTT CCTCGATCCG GAAATGATCG GCGGCGTCGA TGTCGTGCGC
GGTCCGAGCG CCAACATCTA CGGCTCGGGC GCGATCGGTG GCGTGGTCTC GTTTCGGACC
AAGGACATCG ACGACGTATT GCGGGCCGGC GAACGCTGGG GCGTCGACAT GACGGGCTCC
TATGGCAGCA ACAATTCCCG TGGGCTCGGC TCGGTGTTCG GCGGCATCCG GGTCGATCCG
ACCGTCGACG TGTTCGGCGG CGCGCTGTAC CGCACGCAGG GCAACTACAA GGACGGCGCC
GGCACCGAGA TCGGCAATAC CGGCAACGAC CTCGCCGGCG GGTTGCTCAA GCTCACGGTG
CGGCCGGCCG AGGGCCACGA GGTCAAGATA GGCGGCCTGT TCCAGGACTA CAATTACAAC
ATCGGCCAGT TCAACCGCGG ACCGGTGCTG ACCGCGGCGC AGCGCGCACT TTACCAAGGC
TCGTCGGTCT ACGACTCCAA CGTGCGGAAT TCGACCGGAA CGTTGAGCTG GAAGTACTCA
CGGCCGGACG ACATGCTGTT CGACTGGAAC ATCAGCCTGT ACGGCAACCG CACCGACAAC
GACCAGACCA AGACCTATCA CAATTCCACC AGCGGTTCGG CCTATTGCGG CACCGGAAAC
TACGGCAACA ACATCTCGGG TTGCATCGGC GACAAGCGCG GCTACCGGCT CGATACGATC
GGCATCGACG CCAACAACAC CACGCGGTTC GACTACGGCG ACTGGCGCAC CGCGGTGACC
TACGGCTTCG ACGCCTTCAA CGACAAGGTC ACGACCTCGG ACTCGCGAGG CAACTCCAAC
ATCACGACCC CGAGCGGCGA GCGCACGGTG TCCGGCGGAT TCGTCCAGCT CAAGAACAAC
TATGCGAGCT GGCTCGAGGT GATCAGCGCA GCGCGGTTCG ATCATTACGA GCTCAATTCG
CAGACCAACT CCGCGAGCGG CAGCCGGCTG TCGCCCAAGA TCACGGTCGG CGTTACCCCG
CTGGCGGGCC TCACGCCCTA TCTCAGCTAT GCCGAAGGCT ACCGCGCGCC GTCGATCACC
GAGACGCTGA TCGCGGGCTC GCACGCCACC GGCGGCGGGC CGGCGCTGTT CGCCTGTGCG
GACGGCGCGA CGGGTCTGTT CTGCCTGATC CCGAACACCG GGCTGCGGCC CGAAGTCGGA
AAGAACAAGG AAGTCGGCAT CAACCTCAAA TACAACGACG TGTTCATCGC GGGTGACAGC
TTCCGGGGCA AGATCAACGC CTTCCGCAAT GATATCGACA ACTACATCGA CCTGGTCGGG
TCGCCGCCGC AGGCGTCGCG GCTGGGGGCT GCTTACGGCC TCTATAGCAA GAATTACCAG
TACCAGAATA TCCCGCACGC GCGGATCGAC GGCGTCGAAC TCGAGACGTC CTACGATGCC
GGGCTATGGT TCGTCGGCGT CAGCGCTTCT GCGCTGCGCG GCACCAACCC CGATACCGGA
ATCGGTCTCG CCGCGGTTCC GTCGCGAAAG GTCGTCACCT CGGGCGGCGT CCGCTTGCTC
GACCGTCAAT TGACGATCGC GGCGCAATGG GCATCTTATG CGGGCAACTC CAATCTTCCG
ACCGGCTATC TGCCGGCGAC ATCCTATGAT CTGGTGAATC TCAACGTGTC GTACCGGCCG
ACGTCGGACG TCACCGTGAA CTTCTCGATC GATAATCTGC TGAACAATTA CTATCGTCCC
TATGCGATCC CGGGATCGTC GTCGGACGGA ACCACGCAGA ACGACGTACT GTTCAGCAGT
CCCGGGCCGG GCATCGTGTA CAAGGGCGGG ATCAAGGTGC ACTTCGGAGG TGCATAG
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| Protein sequence | MVGLNSRICA LLLSVSVIAL AASPSAAQTA VLSPQSKKQK PVTLDQVAKP ALQMPATDPL
DAYAQAGPST QSLDAITVVS TKNEERAIDA LAPASAITVD QIQRLQPNRL QDIFVATPGV
SFQDRGDDPS TAINIRGLQD FGRVGVVVDG ARQNYQRSGH NAQGSLFLDP EMIGGVDVVR
GPSANIYGSG AIGGVVSFRT KDIDDVLRAG ERWGVDMTGS YGSNNSRGLG SVFGGIRVDP
TVDVFGGALY RTQGNYKDGA GTEIGNTGND LAGGLLKLTV RPAEGHEVKI GGLFQDYNYN
IGQFNRGPVL TAAQRALYQG SSVYDSNVRN STGTLSWKYS RPDDMLFDWN ISLYGNRTDN
DQTKTYHNST SGSAYCGTGN YGNNISGCIG DKRGYRLDTI GIDANNTTRF DYGDWRTAVT
YGFDAFNDKV TTSDSRGNSN ITTPSGERTV SGGFVQLKNN YASWLEVISA ARFDHYELNS
QTNSASGSRL SPKITVGVTP LAGLTPYLSY AEGYRAPSIT ETLIAGSHAT GGGPALFACA
DGATGLFCLI PNTGLRPEVG KNKEVGINLK YNDVFIAGDS FRGKINAFRN DIDNYIDLVG
SPPQASRLGA AYGLYSKNYQ YQNIPHARID GVELETSYDA GLWFVGVSAS ALRGTNPDTG
IGLAAVPSRK VVTSGGVRLL DRQLTIAAQW ASYAGNSNLP TGYLPATSYD LVNLNVSYRP
TSDVTVNFSI DNLLNNYYRP YAIPGSSSDG TTQNDVLFSS PGPGIVYKGG IKVHFGGA
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