| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2346 |
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| Symbol | |
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| ID | 4022835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2619049 |
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| End bp | 2621331 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637962539 |
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| Product | CHASE2 domain-containing protein |
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| Protein accession | YP_569479 |
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| Protein GI | 91976820 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4252] Predicted transmembrane sensor domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.285183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGCGGC TGAGCCGTGC CACGCATCCG ATCCTCAGCC GGGCCGCATT GTCGTGGCTG
TGGCTGCGGC TGCGGCGGTC GACGCGCGGC AAGTCGGTCC GCGCCGTCGC CGCGGCGCTG
CTGACGCTGA TCGCGCTGAC CGGGCTGCGT ACCTACGACC CGCGGCTGGT GAACGAGACC
AAGGAGCGCG CGTTCGACGC CTATCAGCGA TTGTCGCCGC GGCCCTACGC CGATCTGCCG
GTGCGGATCG TCGATATCGA CGAGGCATCG CTGGCTGCCT ACGGGCAATG GCCGTGGCCG
CGTACGCGCC TGGCGGCCCT GACCAAGCGG CTCGGAGAAC TCGGCGCAGG CGTCGTCGCC
TACGACATCA TCTTCTCGGA GCCTGACCGC ACGACGCCCG GACGGCTCGC CAATGAACTC
GGCGACGCCG ATCTGCCGGA CCGCGATCTC ACGGTCGCGC TGCTCAAGAG CCTGCCGGAT
CACGATCAGA GTTTCGCGCA GGCGATGCGG AAGACGCCGA CTGTGCTCGG CTTCGCCGCC
CACCGCTTCG CCAACGCCAC GCGACCGTCC GTGAAAGCCG GGCTCGCCGC GGTCGGCGTC
ACGCCGAGCG CGGTGCTGCC GCCGTTCCAG GGCGCCGTCT CCAATCTTCC GCTGCTCGAT
GAAGCCGCCG CCGGCGTCGG CGCGATCAAT CTGTCGGCGC GCGACAGCGG CGTGGTCCGC
CGATTGCCGA TGCTGATGTC GGACGGCGCG CAGGTGTATC CAAGCCTCGC GATCGAGGCG
CTTCGCGTGG CGCAGAACCA GAAGGGCATC GTGGTCCGCG GAACCGGCGC CAGCGGCGAC
GCCGACACCG GCAAGGCCGC GCTGCTCGAC ATGCGGGTCG GTCAGTTCAA GCTGCCGCTG
ACGCCGGACG GCGAGGCCTT GGTGTACTTC AACCGCGACC GCCCGGATCA CTACGTCTCG
GTCAAGGACG TGCTCGATCC CGCCAAGGAT GCCGAGATGC GCGGACGGCT GGAGGGCATG
ATCGTCCTGG TCGGCACCTC CGCGTCGGGC CTGCTCGACG CGCGCGCCAC GCCGCTCGGC
CAGGTGGTGC CCGGCGTCGC GATCCAGGCG CAGATGATCG AGCAGATCAT TGCGCAGGAT
TTCATCGAGC GACCGGATTG GGCGGATGGT TTCGAAATCG TGTTGACGCT GCTGCTCGGC
TCGCTGGTCG CGGCGCTGCT GCTGATCGCC GGCGCGCGAT TTTCGCTGAT CGCCTGCGGC
GTAGTGTTTC TCTGCGCGAT CGGCGGGTCG TGGTTCGCAT TCTCGCATTT CCGGCTCCTG
ATCGATCCGG TGTATCCGTC ACTGGCGACG CTCGCGACCT ATGTGGCGGT CGAGCGCGTG
CTGCACATGG CGACCGACCG CGAGAAGAAA TTCGCCCGCC AGGCGTTCGG GCAATATCTG
GCGCCGGAGC TTCTGGCCAA GCTCGAGCAA TCACCGGACG GGATGCGGCT CGGCGGCGAG
ACCCGCGACC TCAGCGTGAT GTTCATGGAC GTCCGCGGCT TCACGCCGAT CTCGGAGACG
CTGAGCGCGA CCGAACTGGT CGATTTCATC AACACGCTGC TGTCGCCGCT GTCCGACGTG
ATCCAGGACG AGTTCGGCAC CATCGACAAA TACATCGGCG ACTCGATCAT GGCGTTCTGG
AACGCGCCGG TCGACGTGGC CGATCACGCC GCGCGCGCCT GCCGCGCCGC GCTGAAGATG
CGCGCGGTCG TCGAGCAGCT CAACGACGGT GATATGTTCG GATTCGTGGC GAGGGGCATC
GCCGACCCGG TGGTGCGGAT CGGCGTCGGC ATCAATACGG GTTCGGCCTG CGTCGGCAAT
ATGGGGTCGG CGAAGCGGTT CAACTACTCG GCGATGGGCG ACGTGGTGAA CGTCGCGGCG
CGGATCGAAT CCGCGTCGAA GAGTTTCGGC ACGGATTTGT TAGTCTCCGA AGACGTCGCG
CGCGCAGCGC CGGGCATTGC GCTGCTCGAA GCCGGCGAAA TCTTGCTGAA GGGCAAGTCG
CGCCCGACAC GGCTCTATGC GCTCGTCGGC GACGAGACGG TTGCGGCGAC GCCCGAGTTC
GCCGAGCTGA AGCGGCTGCA CCGCCGGTTG CTCGATGCGC TGGCTGGGGG CGACAACAAG
GCTGCTGCCG ATGCGTTGGC GGAGTGCTGC GCTGCCGCGC CTCAGGCGCT GCAAGGGTTG
TACGATCATT TCGCCGAGCG GGTGGGTGCG AAGGACGGTG TGCAGACGCT GGGCGTGGGG
TAG
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| Protein sequence | MRRLSRATHP ILSRAALSWL WLRLRRSTRG KSVRAVAAAL LTLIALTGLR TYDPRLVNET
KERAFDAYQR LSPRPYADLP VRIVDIDEAS LAAYGQWPWP RTRLAALTKR LGELGAGVVA
YDIIFSEPDR TTPGRLANEL GDADLPDRDL TVALLKSLPD HDQSFAQAMR KTPTVLGFAA
HRFANATRPS VKAGLAAVGV TPSAVLPPFQ GAVSNLPLLD EAAAGVGAIN LSARDSGVVR
RLPMLMSDGA QVYPSLAIEA LRVAQNQKGI VVRGTGASGD ADTGKAALLD MRVGQFKLPL
TPDGEALVYF NRDRPDHYVS VKDVLDPAKD AEMRGRLEGM IVLVGTSASG LLDARATPLG
QVVPGVAIQA QMIEQIIAQD FIERPDWADG FEIVLTLLLG SLVAALLLIA GARFSLIACG
VVFLCAIGGS WFAFSHFRLL IDPVYPSLAT LATYVAVERV LHMATDREKK FARQAFGQYL
APELLAKLEQ SPDGMRLGGE TRDLSVMFMD VRGFTPISET LSATELVDFI NTLLSPLSDV
IQDEFGTIDK YIGDSIMAFW NAPVDVADHA ARACRAALKM RAVVEQLNDG DMFGFVARGI
ADPVVRIGVG INTGSACVGN MGSAKRFNYS AMGDVVNVAA RIESASKSFG TDLLVSEDVA
RAAPGIALLE AGEILLKGKS RPTRLYALVG DETVAATPEF AELKRLHRRL LDALAGGDNK
AAADALAECC AAAPQALQGL YDHFAERVGA KDGVQTLGVG
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