Gene RPD_2334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2334 
Symbol 
ID4022823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2606211 
End bp2606855 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content62% 
IMG OID637962527 
Producthypothetical protein 
Protein accessionYP_569467 
Protein GI91976808 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1392] Phosphate transport regulator (distant homolog of PhoU) 
TIGRFAM ID[TIGR00153] conserved hypothetical protein TIGR00153 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.590464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGCT ACTTTCGAGC CTTTCTGCCC AGGGAGGAGA GGTTTTTCGA CCTGTTCGCC 
CGGCATGCCC AGACCGTCGT CCAAGGTGGG CAAGCGCTGC AGGACATGCT TCGGGGAGGC
GACGAGACGC CGGTGCATTG CCAGCGGGTC AGCCATTTCG AGGCCGAAGC CGACGGCATC
ACCCGCGAGG TGCTGACCGC GGTGCGCCGC ACCTTCATCA CCCCGTTCGA CCGCGTCGAC
ATCAAGAACC TGATCACCTC GATGGACGAC GCCATCGACC AGATGCAGCA GACCGCCAAG
GCGGTGATCC TGTTCGAAGT CCGCGAATTC GAGCCGCCGA TGCGCGAGAT CGGCGCGCTG
CTGGTCGACA GCGCCAATCT GGTCGGCCGG GCGTTGCCGC TGATGAAGTC GATCGGGCCG
AATTTGCAGA TGCTGACGGC GATGACCGAG GAGATCGGCA AGCTCGAGGG CCGGGTCGAC
GATTTGCACG ATATCGGCCT GAAGGAGCTG TTCCTCAAGC ACCGCAACGC CAATACGATG
GACTTCATCG TCGGCGCCGA GATCTACGAC CATCTCGAGA AGGTCGCCGA CCGGTTCGAC
GACGTCGCCA ACGAGATCAA CAGCATCGTC ATCGAGCAAG TCTAG
 
Protein sequence
MLRYFRAFLP REERFFDLFA RHAQTVVQGG QALQDMLRGG DETPVHCQRV SHFEAEADGI 
TREVLTAVRR TFITPFDRVD IKNLITSMDD AIDQMQQTAK AVILFEVREF EPPMREIGAL
LVDSANLVGR ALPLMKSIGP NLQMLTAMTE EIGKLEGRVD DLHDIGLKEL FLKHRNANTM
DFIVGAEIYD HLEKVADRFD DVANEINSIV IEQV