| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2175 |
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| Symbol | |
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| ID | 4022658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2427276 |
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| End bp | 2427914 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637962369 |
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| Product | autoinducer synthesis protein |
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| Protein accession | YP_569311 |
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| Protein GI | 91976652 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.533935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCACC TTGTTACCGC TGAGAATTTT ACGCAGTACG AGGGCCTGAT GGAGCAGGCG
TTCCGGCTGC GCCACTCTGT GTTCGTCGAC GAAATGGGTT GGGAGGAGTT GCGGCGAGCA
GACGGTCGCG AGGTCGACCA GTTTGACGAC GGCCATGCCG TTCACATGCT CTATGTGGAG
GACCAGAAGC TGCTCGGATA TCAACGGCTT CTTCCGTCGA TCCGGCCCAA TTTGCTCTCG
ACCGTTCTTC GTCATCTCTG CGATGACGAG CCGCCCGCCG CCGCCGACGT TTGGGAGTGG
ACGCGCTATT GCGTTGCACC GGGGTGCCGT GATCGCGGGC GGATGCTGAG CCCAATCGGC
AACATGCTCC TCTCAGGAAT CGTGGAGTGG GGAATTCAAA ACGGGGTCTC GAAGATCATC
ATCGAGATGA ACCCCATCTG GCTACTTCGC CTGGTTCAAC TGCACTTTAG GGTCGCTCCA
CTGGGAGTTC CCCACGAGGT CGGTAAGGAC AGCGTGGTGG CTGTGACGGC GGCCTTCGAC
CAGCGCACTC TGCTGCGTCT CAGAGAGACG CGCGGCGATG ACCGCCCAAT GCTCGCCGCG
ATGGAGAAGA GCGGGTTGAG CCGAGCTGCC TCGAACTGA
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| Protein sequence | MIHLVTAENF TQYEGLMEQA FRLRHSVFVD EMGWEELRRA DGREVDQFDD GHAVHMLYVE
DQKLLGYQRL LPSIRPNLLS TVLRHLCDDE PPAAADVWEW TRYCVAPGCR DRGRMLSPIG
NMLLSGIVEW GIQNGVSKII IEMNPIWLLR LVQLHFRVAP LGVPHEVGKD SVVAVTAAFD
QRTLLRLRET RGDDRPMLAA MEKSGLSRAA SN
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