Gene RPD_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2117 
Symbol 
ID4022600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2369476 
End bp2369751 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content68% 
IMG OID637962311 
Producthypothetical protein 
Protein accessionYP_569253 
Protein GI91976594 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00114302 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGTC AACCCGAGAT TGCCGACATG CCGAAGCCAG CCGAGACCAC CGATAGTCCC 
CAGGTCCCGT CAGAAGCTGA TCTGGAGGCC CAGGCGGCCG AGCTCGAGGC AGCGGCCGGC
CAGGCCATCG AGGCCTGTGG TGGCGACCCG GTGGCCGCCG TGCGGGCCCT GATTGTCGCC
AATAGCCTGC TCGAGGAAGA GGCCGAACGC GTCTACGCGG CGGCAGGATC CTGGGGATAT
CTCCGCGGCC GGAAGCTCCC GCCGAAAACC ATCTGA
 
Protein sequence
MHRQPEIADM PKPAETTDSP QVPSEADLEA QAAELEAAAG QAIEACGGDP VAAVRALIVA 
NSLLEEEAER VYAAAGSWGY LRGRKLPPKT I