| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2114 |
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| Symbol | |
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| ID | 4022596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2366477 |
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| End bp | 2367061 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637962307 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_569250 |
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| Protein GI | 91976591 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.305015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGATGC GCATCCTCGA CCGGCTTGAG GAGATATTGA TCGCGACGAT GATCGGCGGC
GCCACGCTGC TGATCTTCAT CGCCGTGATG CACCGCTATC TGGTCGGTGT GCCGTTCCTC
TATCCGATCC TGTTCCCGAT CGACCTGTCC TGGGCGCAGG AACTGTGCAT CTACATGTTC
GTGTGGATGG CGAAGTTCGG TGCCGCCTAC GGCGTGCGCA CCGGCATCCA TGTCGGCGTC
GACGTGCTGG TCAACATCAT CCGGCCGAAC ATCCGCAAGG CGGTGATCCT GTTCGGGCTG
TTCTGCGGCG CGCTGTTCAC CTCCATCATC GGCACCATGG GCGCCAAGTT CGTTTACGGA
CTGATGGGTA CCAACCAGAC CTCGCCGGAT CTCGAAATCC CGAGCTGGAT CGTCTACCTC
TGCATTCCGC TCGGGTCGTA TCTGATGTGC TTCCGCTTCC TGCAGGTCGC CTACCACTTC
TGGCGTCACG ACCATCTTCC GCATCATGAT CACAGCCATG TCGAGGGGGT CGACGACCCG
CATATGCCCG GCTCTGCTGC TGCGGCGGCG GAGGCGGTGC GATGA
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| Protein sequence | MLMRILDRLE EILIATMIGG ATLLIFIAVM HRYLVGVPFL YPILFPIDLS WAQELCIYMF
VWMAKFGAAY GVRTGIHVGV DVLVNIIRPN IRKAVILFGL FCGALFTSII GTMGAKFVYG
LMGTNQTSPD LEIPSWIVYL CIPLGSYLMC FRFLQVAYHF WRHDHLPHHD HSHVEGVDDP
HMPGSAAAAA EAVR
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