| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2051 |
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| Symbol | |
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| ID | 4022533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2300418 |
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| End bp | 2301011 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637962244 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_569187 |
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| Protein GI | 91976528 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.117082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAGGCGT TGCTCGGACT GAGCCGGAAG ATCGACGCGT TCAACACCCT GGTTGGGCGA
TGGTTGTCGT GGATGATCGT CCTGGCGGTG ATCATATCTG CCGGCAACGC CGTTATCCGC
AAGACATTCG ACATGTCATC CAACTCATTG CTCGAGTTGC AATGGGTGCT GTTCAGTATC
GTGTTTCTGC TGTGCTCGCC CTGGACGCTG CTCAGCAACG AACACATCCG CATCGACATC
ATCAATCATA GCCTCCCGCT GAAGTTGCGC GGGTGGATCG ATATGATCGG CCACGTCTTC
TTCCTGATGC CGTTCGCGAT CGTGCTGCTG TGGTGGTCGA TTCCATTCTT CCTGGTGTCC
CTGAGTCAGA ACGAGCAGTC GTTCAGCGCC GGCGGCCTGC CACAATGGCC GGCGAAGTCG
CTGATCATGA TCGCCTGCTT GCTGCTGATC ATTCAGGGCA TCTCTGAGAT CATCAAGCGC
GCCGCGATGC TGGCGGGAGT GATACCCGAC AGCAACGTGC TGCAGGGGTC GCAGCACGCC
GCTGAACTCG AGGCCGAGCG ACTGGTGATG CATATCGGCG GCGACAAACT TTGA
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| Protein sequence | MQALLGLSRK IDAFNTLVGR WLSWMIVLAV IISAGNAVIR KTFDMSSNSL LELQWVLFSI
VFLLCSPWTL LSNEHIRIDI INHSLPLKLR GWIDMIGHVF FLMPFAIVLL WWSIPFFLVS
LSQNEQSFSA GGLPQWPAKS LIMIACLLLI IQGISEIIKR AAMLAGVIPD SNVLQGSQHA
AELEAERLVM HIGGDKL
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