Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2046 |
Symbol | |
ID | 4022528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2293042 |
End bp | 2294634 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637962239 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_569182 |
Protein GI | 91976523 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.227598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.375408 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAGT CCGCCGAAAA GCCCGAAGTG TTCCAGCTTC CGGCCGAGAG CCCGGTGGTC GCCCCGGCAC GTAACCGGCG CGCTGCCGCG CAGCGCGTCC GCGAAGCTCG CGATCGGCTG ACCTCGACCA GCGGCACCCG CCCGGCCTTC GATCACGAAC TCGTCCGGCA ATACGCGCAG ACCCGGCTGT CGGCGTCCTT CGTCATCATG CTGCTGGTGG TCGTCACCGG CGCGCTGTTC GGAGTCTGGC TCGATCCGAT CACTGCCGGC GCCTGGACCG TCGGGATGCT GTGCGTCCAT GCCGTGGTGA TCCGCAACTG CAACCGCTTC CTGCAGGAAC CGGCCTCGCC GCCCCGCACT CGCGGCTGGC GGCGGCGCTT CGTAGCGCTC GATCTGCTGT ATGGCCTCGC CTGGACCACG ATCCTGGTGC ACCCTCTCGG GCTCACTGTC GTCTCCAACA CGCTGCTGAT GTTCTTGATG CTGCTGGTGG TCGCGGTCTC CAGCATGCTG GCCGCGAGCC TGCCGATCGC GGCGCTGGCG ACGACGGTGC CGGTGACCTG CGCGATCGCG TTGAACTTCA TCCTCGGCGG CACCTTCGAC AGCTACGTGC TGGCGGCGCT CACGGTCGCG GCCGAGGGCT ATTTCGCCCT GCTCGCCCAT CGCCTGCACT CGACGACGCT GGCGACCCTG GAAGCGCGCG CTGAAAAGGA CGCGCTGATC GGCGAACTCG AACAGGCCAA GGCGATTTCG GACGAGGCGC GGCACCGCGC CGAAGCCGCG AACGTCGCCA AGTCGCGGTT CCTCGCGCAG ATGAGTCACG AACTGCGCAC GCCGCTCAAC GCCATTCTCG GCTTTTCCGA AGTGATGAAG AGCGAAATTT TCGGCGCGCA CGCCGTGCCG GTCTACAAGG ACTACTCCGC GGACATCCAC AATTCCGGCG TCCACCTGCT CAACCTGATC AACGAAATTC TCGACCTGTC GCGGATCGAG GCAGGCCGCT ACGAGCTCAA CGAGGAAGCG ATCTCACTTG TCCATGTGGT GAGCGACTGT CACCACCTGC TGAAGCTGCG CGCCTCCAGC CGCGGCATCA CTATCCACGA AGTTTTCGAA CAAGGCATGC CGCGGATCTG GGGCGACGAG CGCGCCGTGC GTCAGGTCGT GCTCAATCTG CTGTCGAACG CGATCAAGTT TACGCCGCAG GGCGGCGAAA TCTGGCTCAA GGTCGGCTGG ACCGCGTCGG GCGGTCAATA TCTCAGCGTC AAGGACACCG GCTCGGGCAT CCCCGAGGAG GAAATCCCGA TCGTGCTGGC CTCGTTTGGC CAAGGCTCCA ACTCGATCAA ATCTGCCGAA CAGGGAGCCG GCCTCGGACT GCCGATCGCC AAGAGCTTGG TGGACATGCA CGGCGGCACC TTCACGCTGA AGTCGAAATT GCGGATCAGC ACCGAAGTGA TCGTGACCTT CCCGCCAGAG CGTGTGATGT CGGCGCTGGC GCCGATGGCG GACGAAGCGC CGCTGCAGCC GAGCCTCGTC GAGACCGACG AGCGCAGCCG TGTTCGCGGC AAGCCGATCA TGAACGCCGG CACCGGGCTG TAG
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Protein sequence | MSESAEKPEV FQLPAESPVV APARNRRAAA QRVREARDRL TSTSGTRPAF DHELVRQYAQ TRLSASFVIM LLVVVTGALF GVWLDPITAG AWTVGMLCVH AVVIRNCNRF LQEPASPPRT RGWRRRFVAL DLLYGLAWTT ILVHPLGLTV VSNTLLMFLM LLVVAVSSML AASLPIAALA TTVPVTCAIA LNFILGGTFD SYVLAALTVA AEGYFALLAH RLHSTTLATL EARAEKDALI GELEQAKAIS DEARHRAEAA NVAKSRFLAQ MSHELRTPLN AILGFSEVMK SEIFGAHAVP VYKDYSADIH NSGVHLLNLI NEILDLSRIE AGRYELNEEA ISLVHVVSDC HHLLKLRASS RGITIHEVFE QGMPRIWGDE RAVRQVVLNL LSNAIKFTPQ GGEIWLKVGW TASGGQYLSV KDTGSGIPEE EIPIVLASFG QGSNSIKSAE QGAGLGLPIA KSLVDMHGGT FTLKSKLRIS TEVIVTFPPE RVMSALAPMA DEAPLQPSLV ETDERSRVRG KPIMNAGTGL
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