Gene RPD_2036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2036 
Symbol 
ID4022518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2282962 
End bp2283582 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content59% 
IMG OID637962229 
Productregulatory protein, TetR 
Protein accessionYP_569172 
Protein GI91976513 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.284785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCCTG AAACAAAGAA ACGTGCCCGG CGCAAAGCCG AGCGGCCGGC AGAGATCCTC 
GACGCGGCCT TCGAGGAATT CGTGAAGCAC GGCTACTCAG CGGCTCGTCT CGAGGACGTC
GCCGCCCTCG CCGGGGTGAC CAAGGGAACG ATCTATTTTT ACTTCGACAC CAAGGAACGC
GTGTTCGAGG AAATGGTCCG GCACAAATCC AACGAGTTTC TTCCGAATCT AAAAGACTAC
GCCCTCACCC TCGGAGGTTC GCACACAGAA CGCCTGCGTG CATTGGTGAT CTTCACTTAT
GCGCACATTG CGGAGAACAG GGCGTCCCGC GAGATCCTGC GCTTCCTGAT CTCAGAAGGA
GGCCGATTCC CCGGGCTGGT CGACCGGCAT TTTGACGAGT TCGTCGAGCC GATGATGCAG
CAGTTCAAGA ATGTGATCGA TTCCGGCGTC GCCGCCGGCG AGTTCCGCGA CGCCCCCGCG
ACCGCATTCA CCGAAATCGT CATGAGTCCC GCCCTGCTGC TGAGTCTGTG GTCATTGCTG
TTCGGCACAC GGAGACAATT CGACATGGGC GCCTTCACGG AAGCCAGCAT CGATCTCATC
ATGCGCGGCC TTGCCAAATG A
 
Protein sequence
MPPETKKRAR RKAERPAEIL DAAFEEFVKH GYSAARLEDV AALAGVTKGT IYFYFDTKER 
VFEEMVRHKS NEFLPNLKDY ALTLGGSHTE RLRALVIFTY AHIAENRASR EILRFLISEG
GRFPGLVDRH FDEFVEPMMQ QFKNVIDSGV AAGEFRDAPA TAFTEIVMSP ALLLSLWSLL
FGTRRQFDMG AFTEASIDLI MRGLAK