Gene RPD_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2010 
Symbol 
ID4022492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2248220 
End bp2249125 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content65% 
IMG OID637962203 
Productferredoxin 
Protein accessionYP_569146 
Protein GI91976487 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCAATA TTACCTTCTC TTCGCCCGTG ATGGCGAAGG ACGTCACCGT CTACGCCGTC 
GCCGGCGATC GCGGCACCAT TCTCGCCGTC GCCAAAGCGC ACAAGATTCC GATCCCGTTC
GACTGTCAGG ACGGCGAATG CGGCTCCTGC CTGGTGCAGG TCGAGCACTT CAATCCGAAG
GCCAAGTCCG CCGTGGCTCT GACCGAGAAG GAGAAGGAAG TGCTGCGCCA GCTCGGCAAG
ATCTCCAAGG ACGAGATCGC CAACGCCGAG GTCAACGACA TTCCGCCGCG CTACCGTCTC
GCTTGCCAGT GCTTCGTTCG CAACGAGGAC ATCATGGTGC GGTTCGAAGG CGACAAGACC
CAGCCGCAGA AACTCGCCGT CACGCACGCC GCCGCACGCT TCAAGGGCGG CCTCGAGATC
GCGACGCTGC CGGAGTTCTT CAGCTACGCG GCAAAGGTCG AGGAAGACGC CGCCCTGCAC
TACGACCAAC TCGCCAAGGC GATGGCGGAG GCCGGCAACA GCGCCGTAGC CAAGCTGTTC
GCGCAGCTCG CCGATTTCTC GCGGTTGCAT CTCGCCGAGG TGAAGTCGCG CGCCGGCAAT
ATCGATCCCG GCAAGTCGGT GCCGCCGGAT TACGCGTGGC CTGATCACGC CACGCCGGAG
CGCGCCGCGG TGTGGGCGTC CGACACGACG ATGACCCGCC TCGGCGGTCT GAAGGCGGCG
CTGCAGGGCG AGCGCCGCGG CTACGAGTTC TACCGCGCGG TCGAGGCCAC CACTAAATCG
CCGGAGGTCG CGGCCGCGGC GAAGGAATTC GTCGGCGAGG AAGCCGAGCA CGTCCGCATC
CTCGAAGCCT GGATCACCCA GGAAGAATGG TCGCTCAAGC ACGCCAGGGC GGCTGAAAAC
GCCTGA
 
Protein sequence
MANITFSSPV MAKDVTVYAV AGDRGTILAV AKAHKIPIPF DCQDGECGSC LVQVEHFNPK 
AKSAVALTEK EKEVLRQLGK ISKDEIANAE VNDIPPRYRL ACQCFVRNED IMVRFEGDKT
QPQKLAVTHA AARFKGGLEI ATLPEFFSYA AKVEEDAALH YDQLAKAMAE AGNSAVAKLF
AQLADFSRLH LAEVKSRAGN IDPGKSVPPD YAWPDHATPE RAAVWASDTT MTRLGGLKAA
LQGERRGYEF YRAVEATTKS PEVAAAAKEF VGEEAEHVRI LEAWITQEEW SLKHARAAEN
A