Gene RPD_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2009 
Symbol 
ID4022491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2247663 
End bp2248151 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content64% 
IMG OID637962202 
Producthypothetical protein 
Protein accessionYP_569145 
Protein GI91976486 
COG category[S] Function unknown 
COG ID[COG1633] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGG TCGAACAGTT TCTGGCGCAC TCCATCCGCC TCGAGCAAGA AGCGGCGCTG 
CGGTTCGGTC AACTCGCCGA CGCAATGGAC TCCTGCGGCA ACAAGGAAGT CTCGAAGCTG
TTCCGGCAGC TCGCGGACTA CTCACGGATG CATCAGGCCG ACGCCCAGGC GCGCGCCGGT
TTCCGCGACA TCCCCGAGAT GGAATCCGGC GATTTCAAGT GGCCGGGGAT CGAGAGCCCG
GAGACCGCGG CGATCTGGGG CACCGACCCC TTCATCGGCC GCGACCTTGC ACTGGAAATC
GCGCTCGAAG CCGAGACCGG CGCCTACGAT TGGTACAAGA ACGTGCTCGA CACCACCGAT
AATCCGGAGA TCAAGGCTCT GGCGCAGGAG TTCGTCGCCG AGGAAAGCGG CCACGTCGCC
GAACTGCATC GCTGGATCGC CCTGCACAAG GCCGGCAAGC CGCTGCCGAT GGAGATCGTC
CCGTTCTGA
 
Protein sequence
METVEQFLAH SIRLEQEAAL RFGQLADAMD SCGNKEVSKL FRQLADYSRM HQADAQARAG 
FRDIPEMESG DFKWPGIESP ETAAIWGTDP FIGRDLALEI ALEAETGAYD WYKNVLDTTD
NPEIKALAQE FVAEESGHVA ELHRWIALHK AGKPLPMEIV PF