| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1938 |
|---|
| Symbol | |
|---|
| ID | 4022420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 2177139 |
|---|
| End bp | 2177918 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637962131 |
|---|
| Product | aldolase II superfamily protein |
|---|
| Protein accession | YP_569074 |
|---|
| Protein GI | 91976415 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0215875 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.268304 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCCAG CCGAAGCACG CCTGAGAGAT GCGCCCTCGG ATATGACGGA GGCCGAGTGG
GAGCAGCGGG TCAACCTTGC CGCCTGCTAT CGCCTGGTCG CCTATTACGG CTGGGACGAT
CTGGTCGACA CTCACATTTC GGCACGCGTG CCCGGGCCTG AGCATCACTT CCTGATCAAT
CCCTACGGCC TGATGTTCGA CGAGATCACC GCGTCCAGCC TGGTCAAGGT CGACCTCGAC
GGCAATCAGC TCACCCAGAG CCAGTACAAG ATCAACCCGG CCGGCTTCAC CATCCACTCG
GCGATCCACG AGGTCCGCGA AGACGCCGGC TGCGTCATGC ATCTGCACAC GCCCGACGGC
ACCGCGGTGG CGAGTTGCAT GGAAGGCCTG CTGCCGACGA ACCAGACCGC GCATTTCGTC
ACCGGCGACC TCGCCTATCA CGACTATGAG GGCGTCGCGC TGGATCACGA CGAGCGGCCG
CGGCTGCAGC GCGATCTCGG CAACAAGAAC CACATGCTGC TGCGCAATCA TGGCACGCTG
ACGGTGGGCC GTTCGGTCGC CTCCGCCTTC GAGCGGATGT ATCATCTGGA GCGTTCCTGC
ACGATGCAGG TTCGTACGAA GATGCTCGGC CCGACCGCCT ACCCGATCGA GAACGTGGTG
ATCGACAAGA ACCACACGCT GATCGCCAAC CAGGACGCGA TGGAACTGCG TTCCACCAAA
CTGGTCTGGC CGCCGCTGCT GCGCAAGCTC GACCGGATGG ACCCGAGCTA CCGCAATTGA
|
|---|
| Protein sequence | MSPAEARLRD APSDMTEAEW EQRVNLAACY RLVAYYGWDD LVDTHISARV PGPEHHFLIN
PYGLMFDEIT ASSLVKVDLD GNQLTQSQYK INPAGFTIHS AIHEVREDAG CVMHLHTPDG
TAVASCMEGL LPTNQTAHFV TGDLAYHDYE GVALDHDERP RLQRDLGNKN HMLLRNHGTL
TVGRSVASAF ERMYHLERSC TMQVRTKMLG PTAYPIENVV IDKNHTLIAN QDAMELRSTK
LVWPPLLRKL DRMDPSYRN
|
|---|
| |