Gene RPD_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1930 
Symbol 
ID4022412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2168401 
End bp2168892 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content67% 
IMG OID637962123 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_569066 
Protein GI91976407 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.222358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.889585 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGG CGCTGATCGC ACTCGGCGGC AATGTCGGTG ATGTTCGCGC GACCTTCGAA 
AAGGCGATTG CCAACATCTG CGGCATGACC CAGGGCGAGT TGCTGGCGCG CTCCTCGGAC
TATGCGACCC CGCCCTGGGG CGACGAGCAA CAGGACCGCT TCGTCAACGC CTGCATCGCG
ATCGACACCG CGCTCGATCC GATGGCGCTG CTGTACACCC TGCACAAGAT CGAGAAGCGG
TTCGGCCGCG ACCGCGCCCA CGAGCGGCGT TGGGGGCCGC GCACGCTCGA TCTCGACCTG
CTCGCCTATG GCGACGCTGC GATCGAGCGC CCCGACCTGA CGCTGCCGCA TCCACGGCTG
TTCGAGCGCG CCTTCGTGCT GGCGCCGCTG GTCGAAATTC GGCCGGATGG AATGATCGCC
GGAAAATCGT TGAAACTGGC TCTGGCGGCG CTTTCCACCG ACGGAATCGA GCGTCTGCCG
CCGCGCGGCT GA
 
Protein sequence
MAEALIALGG NVGDVRATFE KAIANICGMT QGELLARSSD YATPPWGDEQ QDRFVNACIA 
IDTALDPMAL LYTLHKIEKR FGRDRAHERR WGPRTLDLDL LAYGDAAIER PDLTLPHPRL
FERAFVLAPL VEIRPDGMIA GKSLKLALAA LSTDGIERLP PRG