Gene RPD_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1923 
Symbol 
ID4022405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2161580 
End bp2162059 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content62% 
IMG OID637962116 
Producthypothetical protein 
Protein accessionYP_569059 
Protein GI91976400 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.540615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAG CCTATTACAG CGCCGTCCTC GATCATCCGC TGGCGACCGT GTGGTCGCTG 
GTCCGCGATT TCAACAACTA CCCGGCCTAT ATCGAAGGCG TGACCGAGAG CGTGATCGAG
GACGACAAGC GCGGCGACGA GGTCGGCGCG GTCCGGCGGT TCTGCTATCT GCACAACTGG
GTCCGTCAGC GCCTCGTCGT GCATTCCGAC GACGAGCATT CGCTGACCTA TTCAGGTCTT
GAGCCGCTGC CGTTTCCCGA AGCAGAGGGC GGTGACGTCC CGGCGCCGAC CGACTACAAG
GGAACCATTC AGCTGATGCC GGTGGTCGAC GGCAATCGGA CCTTCATCGC CTGGTGGGTG
GAGCTGGAAA CAGCGCCGGC CGACGCCGAT CGATGGCACG CGCAGTTCGA ATCCTGGATA
CCCGACTGGT GCGGCTCTCT GACCAGGGCC TTGGCGCGGC AATCAGCTAA TCAGCTGTAA
 
Protein sequence
MTKAYYSAVL DHPLATVWSL VRDFNNYPAY IEGVTESVIE DDKRGDEVGA VRRFCYLHNW 
VRQRLVVHSD DEHSLTYSGL EPLPFPEAEG GDVPAPTDYK GTIQLMPVVD GNRTFIAWWV
ELETAPADAD RWHAQFESWI PDWCGSLTRA LARQSANQL