Gene RPD_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1922 
Symbol 
ID4022404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2160407 
End bp2161399 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content70% 
IMG OID637962115 
Productarginine/ornithine transport system ATPase 
Protein accessionYP_569058 
Protein GI91976399 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1703] Putative periplasmic protein kinase ArgK and related GTPases of G3E family 
TIGRFAM ID[TIGR00750] LAO/AO transport system ATPase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.597439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCATA AGACGCCGAC TCCCCCCGAC ATTGCAGCGC GCGCCAAGGA AATCCGCGCC 
GGCAACCGCG CCGCGCTGGC GCGCGCGATC ACGCTGATCG AAAGCCGCCG CGCCGATCAT
CAGGCCGCTG CGCGGGCGCT GGTGCAGGAA CTGTTGCCGG CAACCGGCCG CGCCATCCGC
GTCGGCATCA CCGGCTCGCC CGGCGTCGGC AAGTCGACCA CCATCGACGC GCTCGGCATG
TACCTGATCG AACAGGGCCA CAAGGTCGCG GTGTTGGCGG TCGATCCGTC ATCGGCGCGC
ACCGGCGGCT CGATCCTCGG CGACAAGACC CGGATGGCGC GGCTGTCGGC CGAGCCGCAC
GCCTTCATCC GCCCCTCGCC CTCCTCCGGC ACGCTCGGCG GTGTCGCGGC GAAGACGCGG
GAGGCGATGC TGCTGTGCGA GGCCGCCGGC TTCGACGTGG TGCTGGTCGA AACCGTCGGC
ATCGGCCAGT CCGAGACCGC GGTCTGCGAC ATGACTGACT TCTTCCTCGC GCTGATGCTG
CCGGGGGCCG GCGACGAGCT GCAGGGCATC AAGAAGGGCC TGGTCGAGCT CGCCGACATG
ATCGCGATCA ACAAGGCGGA CGGCGACAAC ATCGCCCGCG CCAATCTCGC CGCCGGCGAG
TATCGCGCCG CGCTGCACAT TCTCACCCCG CGCTCGCCGC ACTGGCAGCC CCCGGTGGTG
ACCTATTCGG CGGTGACCGG CAATGGCATC GCCGGGTTGT GGCAAAGCAT CCTCGACCAT
CGCAACGCCA CGCAGGCGCC CGGCGAGTTC GACGCGCGGC GGCGCGAGCA GCAAGTGAAG
TGGATGTGGA CGATGCTCGA GGACCGCTGG AAGGCGCGGC TGAAGAGCGA TCCGGCAATC
CGCACCAAGG TGAAGCACAC CGAGGCGGCC GTCGCCGAGG GCCGAGTCAC GCCGGCGATC
GGCGCCGATC AGATCGCGGA GCTTTTGGCG TGA
 
Protein sequence
MIHKTPTPPD IAARAKEIRA GNRAALARAI TLIESRRADH QAAARALVQE LLPATGRAIR 
VGITGSPGVG KSTTIDALGM YLIEQGHKVA VLAVDPSSAR TGGSILGDKT RMARLSAEPH
AFIRPSPSSG TLGGVAAKTR EAMLLCEAAG FDVVLVETVG IGQSETAVCD MTDFFLALML
PGAGDELQGI KKGLVELADM IAINKADGDN IARANLAAGE YRAALHILTP RSPHWQPPVV
TYSAVTGNGI AGLWQSILDH RNATQAPGEF DARRREQQVK WMWTMLEDRW KARLKSDPAI
RTKVKHTEAA VAEGRVTPAI GADQIAELLA