Gene RPD_1865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1865 
Symbol 
ID4022347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2086258 
End bp2087037 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content68% 
IMG OID637962058 
Productenoyl-CoA hydratase 
Protein accessionYP_569001 
Protein GI91976342 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0130428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.177822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGC AGTTCTCCAC CGTGACCCGC AAGGGGCCGA TCACCATCGT CACGCTGTCG 
CGGCCGGAGG TCTACAACGC GCTGCACACC GACGCGCATT TCGAACTCGA AGGCGTGTTC
AACGACTTCG CCGCCGATCC GGACCAATGG GTCGCGATCG TCACAGGCGC CGGCGACAAG
GCGTTCTGTG CCGGCAACGA TCTGAAGTGG CAGGCCGCCG GCGGCAAGCG CGGCTGGGGC
GAGAGCGGCT TCGGCGGGCT GACTTCGCGG TTCGATTGCG ACAAGCCCAT CATCGCCGCA
GTCAACGGCG TGGCGATGGG CGGCGGCTTC GAAATCGCGC TCAGCTGCGA CCTGATCATC
GCTTCGGAAA ACGCCACCTT CGCGTTGCCG GAGCCGCGCG TCGGCCTCGC CGCGCTCGCC
GGCGGCCTGC ACCGCCTGCC CCGCCAGATC GGGCTGAAGC GCGCGATGGG CATGATCCTC
ACCGCACGGC ACGTCCCCGC CCGCGAAGGC CTCGAGCTCG GTTTCGTCAA CGAAGTGGTC
CCCGCCGGAG AGGCGCTGGC CGCCGCCGAG CGCTGGGCGC AGACGATCTG CAGCAATTCG
CCAATGTCGA TCCGCGCCTC GAAACAGACG CTGTCGCGCG GCCTCGAAGT GTCGCTGCAA
CAGGCGATCG CCGAGCAGCG CGACTATCCC GCCGTGAAAG CGATGGCCGC CTCGCAGGAC
TACATCGAGG GGCCGAAAGC GTTCGCGGAA AAACGCGCGC CGAACTGGAC GGGGAAGTAG
 
Protein sequence
MALQFSTVTR KGPITIVTLS RPEVYNALHT DAHFELEGVF NDFAADPDQW VAIVTGAGDK 
AFCAGNDLKW QAAGGKRGWG ESGFGGLTSR FDCDKPIIAA VNGVAMGGGF EIALSCDLII
ASENATFALP EPRVGLAALA GGLHRLPRQI GLKRAMGMIL TARHVPAREG LELGFVNEVV
PAGEALAAAE RWAQTICSNS PMSIRASKQT LSRGLEVSLQ QAIAEQRDYP AVKAMAASQD
YIEGPKAFAE KRAPNWTGK