Gene RPD_1846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1846 
Symbol 
ID4022328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2066314 
End bp2067132 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content64% 
IMG OID637962040 
Producthypothetical protein 
Protein accessionYP_568983 
Protein GI91976324 
COG category[S] Function unknown 
COG ID[COG4336] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.140697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.77685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTT TTCCGGCAGG GCAGCAGTTC CAGACGGAAG GGGAGTGCCT TCCGTCCTAC 
CAGGTGCGCC TCGCCTGCCG GGCCGGACAG GCCGACACTA CAGCCGGCGT CGCGCCCGGT
TTCGTCCAGG GCAATCTGGC CATTCTGCCT GAGAAATACG CCGCCGCATT TCATCGTTTC
TGCCAGCTCA ATCCCAAGCC TTGCCCGATC ATCGGCATGT CCGACGTCGG CAATCCGCAG
ATTCCCGCGC TCGGCCTCGA TCTCGATATT CGCACCGATC TTCCGCGCTA CCGGGTGTGG
CGCGACGGCG AACTGATCGA GGAGCCGACC GACGTCATGG CGCATTGGCG CGACGATCTG
GTCGCTTTCG TGGTCGGCTG CTCGTTTTCC TTCGAAGAGG CGCTGTTGGC GGACGACATT
CCGATCCGGC ACATCGAACG CAAGGTGCGC GTGCCGATGT ATCGCACCAA CATCGCCTGC
ACGCCGGCCG GTCCGTTCGC GGGGCCGATG GTGGTGTCGA TGCGGCCGCT GAAGCCAGCG
GATGCGATTC GCGCCGTGCA GATCACCTCG CGCTTTCCTT CGGTTCACGG CGCGCCGGTG
CATATCGGGC TGCCGCAGTC GATCGGTATC GCCGACATCG CGAATCCCGA CTATGGCGAT
CCGGTGCCGA TCGCGCCCGA CGAGCTTCCG GTATTTTGGG CCTGCGGCGT CACTCCGCAG
GCGGTGATCG CGGCTGCGAA GGTGCCGTTC GCAATCACCC ACGCGCCCGG ATTGATGCTT
GTCACCGACT TGAAGAACAA GCACCTTGCG GTGCTCTGA
 
Protein sequence
MTVFPAGQQF QTEGECLPSY QVRLACRAGQ ADTTAGVAPG FVQGNLAILP EKYAAAFHRF 
CQLNPKPCPI IGMSDVGNPQ IPALGLDLDI RTDLPRYRVW RDGELIEEPT DVMAHWRDDL
VAFVVGCSFS FEEALLADDI PIRHIERKVR VPMYRTNIAC TPAGPFAGPM VVSMRPLKPA
DAIRAVQITS RFPSVHGAPV HIGLPQSIGI ADIANPDYGD PVPIAPDELP VFWACGVTPQ
AVIAAAKVPF AITHAPGLML VTDLKNKHLA VL