Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1846 |
Symbol | |
ID | 4022328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2066314 |
End bp | 2067132 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637962040 |
Product | hypothetical protein |
Protein accession | YP_568983 |
Protein GI | 91976324 |
COG category | [S] Function unknown |
COG ID | [COG4336] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.140697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.77685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTTT TTCCGGCAGG GCAGCAGTTC CAGACGGAAG GGGAGTGCCT TCCGTCCTAC CAGGTGCGCC TCGCCTGCCG GGCCGGACAG GCCGACACTA CAGCCGGCGT CGCGCCCGGT TTCGTCCAGG GCAATCTGGC CATTCTGCCT GAGAAATACG CCGCCGCATT TCATCGTTTC TGCCAGCTCA ATCCCAAGCC TTGCCCGATC ATCGGCATGT CCGACGTCGG CAATCCGCAG ATTCCCGCGC TCGGCCTCGA TCTCGATATT CGCACCGATC TTCCGCGCTA CCGGGTGTGG CGCGACGGCG AACTGATCGA GGAGCCGACC GACGTCATGG CGCATTGGCG CGACGATCTG GTCGCTTTCG TGGTCGGCTG CTCGTTTTCC TTCGAAGAGG CGCTGTTGGC GGACGACATT CCGATCCGGC ACATCGAACG CAAGGTGCGC GTGCCGATGT ATCGCACCAA CATCGCCTGC ACGCCGGCCG GTCCGTTCGC GGGGCCGATG GTGGTGTCGA TGCGGCCGCT GAAGCCAGCG GATGCGATTC GCGCCGTGCA GATCACCTCG CGCTTTCCTT CGGTTCACGG CGCGCCGGTG CATATCGGGC TGCCGCAGTC GATCGGTATC GCCGACATCG CGAATCCCGA CTATGGCGAT CCGGTGCCGA TCGCGCCCGA CGAGCTTCCG GTATTTTGGG CCTGCGGCGT CACTCCGCAG GCGGTGATCG CGGCTGCGAA GGTGCCGTTC GCAATCACCC ACGCGCCCGG ATTGATGCTT GTCACCGACT TGAAGAACAA GCACCTTGCG GTGCTCTGA
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Protein sequence | MTVFPAGQQF QTEGECLPSY QVRLACRAGQ ADTTAGVAPG FVQGNLAILP EKYAAAFHRF CQLNPKPCPI IGMSDVGNPQ IPALGLDLDI RTDLPRYRVW RDGELIEEPT DVMAHWRDDL VAFVVGCSFS FEEALLADDI PIRHIERKVR VPMYRTNIAC TPAGPFAGPM VVSMRPLKPA DAIRAVQITS RFPSVHGAPV HIGLPQSIGI ADIANPDYGD PVPIAPDELP VFWACGVTPQ AVIAAAKVPF AITHAPGLML VTDLKNKHLA VL
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