Gene RPD_1807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1807 
Symbol 
ID4022289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2021461 
End bp2022678 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content66% 
IMG OID637962001 
Productcytochrome P450 
Protein accessionYP_568944 
Protein GI91976285 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2124] Cytochrome P450 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.154982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGG CTCCGATCGA GTTGGCGGCG GCATTCGATC TCGAACGGCT GACGCGCGAT 
TTCTACGACG ATCCCTACCC GACCTATCAC GCCCTGCGGA CGCACGAGCC GATCAAGCGG
TTGCGCAATG GCGGCTATTT CCTGACCCGC TACGACGACC TTGTCGAGGT CTACAAGAAC
ACCACGCTGT TCAGCTCCGA CAAGAAGCGC GAGTTCGCGC CGAAATACGG CGACTCCCTG
CTGTTCGAGC ACCACACCAC CAGCCTGGTG TTCAACGATC CGCCCGCGCA CACCCGGGTG
CGACGGCTGA TCACCGGAGC GCTGTCGCCA CGCGCGATCG CCGGGATGGA GCCGGACCTG
ATCGCGCTGG TCGACCGGCT GCTCGATCGG ATGGAGGCCA AAGGCACGCT CGATCTGATC
GAAGACTTCG CCGCCGCCAT CCCGATCGAG GTCATCGGCA ATCTGCTCGG CATCCCTCAT
GACGAGCGTG GCCCGCTCCG CGACTGGTCG CTGGCGATTC TGGGCGCGCT GGAGCCGGTG
ATCGGACCGG ACACCTTCGC GCGCGGCAAT GATTCGATTC GCGACTTCAT CGCCTATCTC
GAAACCCTGA TCGCGCGACG CCGCGCCAAT CCCGGCGATC CGGAGCGTGA CGTGCTGACG
AAGCTGATCC AGGGCGACGG CGGCGGAGAG CAATTATCCG CCAGGGAGCT GCTGCACAAC
TGCATCTTCC TGCTCAATGC CGGGCACGAG ACCACGACCA ATTTGATCGG AAACGGTCTG
GTCGCGCTCG CGGTCCACCC CGCGGAGAAG CAGCGGCTGA TCGCGCAGCC GGGGCTGGTG
CGGACCGCGG TCGAGGAAAT CCTGCGCTAC GAGAGTTCGA ACCAGCTCGG CAACCGCATC
ACGACGGCCG ACGTCGAGAT CGGCGGCGTG GCGATGCCGG CGAACACGTC GCTGACGCTG
TGCATCGGCG CCGCCAACCG CGACCCGGAG CATTTCCCCG ACCCCGACAG ATTCGACGTC
GCGCGGTCGC CGAACCGGCA CCTCGCCTTT GCGACGGGAC CGCATCAATG CGCCGGGATG
GCGCTGGCGC GGCTCGAGGG CGCGATCGCG CTCCGGCGGT TTCTGGCGCG TTTCCCGAAC
TATGCGCTCG CTGGCGCGCC GACGCGTGGC GGACGCGTGC GGTTTCGCGG CTATCTGCAG
GCGCCGTGCC GGATTTAG
 
Protein sequence
METAPIELAA AFDLERLTRD FYDDPYPTYH ALRTHEPIKR LRNGGYFLTR YDDLVEVYKN 
TTLFSSDKKR EFAPKYGDSL LFEHHTTSLV FNDPPAHTRV RRLITGALSP RAIAGMEPDL
IALVDRLLDR MEAKGTLDLI EDFAAAIPIE VIGNLLGIPH DERGPLRDWS LAILGALEPV
IGPDTFARGN DSIRDFIAYL ETLIARRRAN PGDPERDVLT KLIQGDGGGE QLSARELLHN
CIFLLNAGHE TTTNLIGNGL VALAVHPAEK QRLIAQPGLV RTAVEEILRY ESSNQLGNRI
TTADVEIGGV AMPANTSLTL CIGAANRDPE HFPDPDRFDV ARSPNRHLAF ATGPHQCAGM
ALARLEGAIA LRRFLARFPN YALAGAPTRG GRVRFRGYLQ APCRI