Gene RPD_1805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1805 
Symbol 
ID4022287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2019205 
End bp2020161 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content64% 
IMG OID637961999 
ProductPfkB 
Protein accessionYP_568942 
Protein GI91976283 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.512756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTGCA GGAAGCAGTG CTATTGTCTT CAAGCCGGAA CAGCCCCGCA GTACGGAACG 
CTCATGCACG CACTTTTCAT CGGACAAACC TATATCGACG TCACCTTCAT CACCGACCAT
CTGCCGACCG GTGACGAAAA ACATGTGGCG TCCGACTACG CGGTGTCATT CGGCGGCAAC
GCGGTGACCG CGGCGTTCTG CTGCGCCAAG CTCGGGATCG TGCCCGACCT GATCGCCACC
GTCGCCAATG ACTGGCTGGG GCGGATGTTT CAGGACATGA GCGCCAAATA CGGGATCGAG
ATCCATCCGC GCAAGGTCGC CTCCTCGTCG CTGTCCTTCA TCATGCCGAA GGACGGCAAG
CGCGCTATCG TGCGCTGCCG CGACGACGAC CACATCCATC CGTTCCCGCT GCTCAACCTC
GGCAATTGCC GCGCGCTGCA TGTCGACGGC CATCAGCCCG ACGCCGCGAT CCACTACGCC
AAGCTGTGCC GCGAGAGCGG CATCCTGACC TCGCTCGACG GCGGCGGGCT GCGCACCAAT
ACGCACGAGC TTCTGGAGTT CATCGACGTC GCCATCGTCG CCGAGCGGCT CTGCGAACAG
ATGGACATGA CGTCGGATCA GATGCTCGAT TATCTGAAAG CACGCGGCTG CAAGGTCGGC
GGTGTCACGC AAGGCGAGCG CGGTCTCCTC TGGTACGACG AGACGGGCAC GGTGCACACA
CTGCCCGCGC TACCGGTCCC CCGCGAGCGC GTGCTCGACA CCAACGGCGC CGGTGACGTC
TTTCACGGCG CCTACGTGTT CTCGTATCTC AACAGCCCCG AGAAGAGCTG GCAGCAGCAC
TTCGAGTTCG CCCGCGCCGC TTCGACCTAC AAGATTCAGA AGCTCGGCAA CGAAGCCGGG
CTGCCGGCCA TCGCTGATAT CGAAGCGGTG CAGCGCGAGT TCGCGGCCGC GGCCTGA
 
Protein sequence
MACRKQCYCL QAGTAPQYGT LMHALFIGQT YIDVTFITDH LPTGDEKHVA SDYAVSFGGN 
AVTAAFCCAK LGIVPDLIAT VANDWLGRMF QDMSAKYGIE IHPRKVASSS LSFIMPKDGK
RAIVRCRDDD HIHPFPLLNL GNCRALHVDG HQPDAAIHYA KLCRESGILT SLDGGGLRTN
THELLEFIDV AIVAERLCEQ MDMTSDQMLD YLKARGCKVG GVTQGERGLL WYDETGTVHT
LPALPVPRER VLDTNGAGDV FHGAYVFSYL NSPEKSWQQH FEFARAASTY KIQKLGNEAG
LPAIADIEAV QREFAAAA