| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1783 |
|---|
| Symbol | |
|---|
| ID | 4022265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 1997955 |
|---|
| End bp | 1998761 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637961977 |
|---|
| Product | molybdopterin dehydrogenase, FAD-binding |
|---|
| Protein accession | YP_568920 |
|---|
| Protein GI | 91976261 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.400558 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGAAT TCAAGTATCA CCGCCCCGCG ACCGTCCGTC AGGCCGCCAA CCTGCTGATC
AAGAACGAGG ACGCCAAGCT GATCGCCGGC GGCCACACGC TGCTGCCGGT GATGAAGCAG
CGCCTCGCCG CGCCGCCGCA TCTGGTCGAT CTGTCCCATA TCGAAGGCCT CGGCGGCATC
GAGATCAAGG GCCGCTCGCT GGTGATCGGC GCGACCGCCA AACATGCCGA AGTCGCCAGT
TCGCCGATCG TCGGCGAGGC GATCCCCGCG CTTGCGGAGC TGGCGTCGAT GATCGGCGAT
CCGGCGGTGC GTCACAAAGG CACGATCGGC GGCTCTCTCG CCAACAATGA TCCCACCGCG
GACTATCCGG CGGCGGTGCT GGCGCTCGGC GCCACCATCG TCACCAACAA GCGCAAGCTG
AAGCCGGAGG AGTTTTTCCA GGGCCTGTTC ACCACCGCGC TGGAGCCGGA CGAGATCATC
ACCAAGGTGC TGTTTCCGCT GCCGAAGAAG GCAGCATACA TCAAATTCCG CAACCAGGCC
TCGCGCTATG CGCTGGTCGG CGTGTTCGTG GCGCGGCGTC CGTCGGATGT CGGCGTCGCA
GTCACCGGCG CCGGGTCGGA CGGCGTGTTC CGGGTCTCCG CATTCGAGGA GGCGTTGAAG
GCGCGGTTCA ATTCCAAATC GCTCGATGGC ATCCATGTGC CGCATGACGG CTTGAACAGC
GACCTGCATG GCAGCGCGGA ATATCGCGCG CATCTGATCG GCGTGCTGGC GAAGCGCGCG
GTCGATGCCG CCAACGGCAA GGCATGA
|
|---|
| Protein sequence | MYEFKYHRPA TVRQAANLLI KNEDAKLIAG GHTLLPVMKQ RLAAPPHLVD LSHIEGLGGI
EIKGRSLVIG ATAKHAEVAS SPIVGEAIPA LAELASMIGD PAVRHKGTIG GSLANNDPTA
DYPAAVLALG ATIVTNKRKL KPEEFFQGLF TTALEPDEII TKVLFPLPKK AAYIKFRNQA
SRYALVGVFV ARRPSDVGVA VTGAGSDGVF RVSAFEEALK ARFNSKSLDG IHVPHDGLNS
DLHGSAEYRA HLIGVLAKRA VDAANGKA
|
|---|
| |