Gene RPD_1768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1768 
Symbol 
ID4022250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1983316 
End bp1984116 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content71% 
IMG OID637961962 
Productglutamate racemase 
Protein accessionYP_568905 
Protein GI91976246 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.454909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.641778 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCTCGC ATCCGAACAT CCTGGTCTTC GATTCCGGCC TCGGCGGGCT GACGGTGCTG 
CGCGAGATCG TCAAGGCGCG GCCGGATGCG CACGTCACCT ATGCGGCCGA CGATGCGTTC
TTTCCCTATG GCCAGCACAG CGAAGAGGCG CTGGTCGGCC GGGTGGTGCC GCTGATCGGC
GAGCTGATCG ACGCCCACAC CCCCGCCCTC GTGGTGATCG CCTGCAACAC CGCCTCGACG
CTGGTGCTGT CGCATCTGCG CGCCGCCTAC AGCGTGCCGT TCGTCGGCAC CGTGCCGGCG
ATCAAGCCGG CCTGCGCGGC GTCGAAGACC AAGCGCGTCT CGGTGCTCGG CACCAGCGGC
ACGGTGAAGC GCGAATACAC CCGCGCGCTG ATCCGCGATT TCGCCGGCGG CTGCGACGTC
ACGCTGGTCG GCTCCGCGCA TCTGGCCGCG CTCGCCGAAG CCGCGCTCGG CGGCGCGGAT
GTCGCCGACG AGGCGATCCG CGCCGAGATC GCGCCCTGTT TCGTCGACGC CGACGGCAGC
CGCACCGACA CCATCGTGCT CGCCTGCACA CACTACCCGC TCTTGCTCGA CCGGCTGATG
CGGCTGGCGC CCTGGCCGGT GGACTGGATC GATCCGGCGC CGGCGATCGC CCGCCGGGTG
GTCACCCTGC TCGGCCCCGG CTCCGGCCAA AGTGATCATC AAAGTGACCA TCCCGGCGCC
GAGATGGTAT TCACATCCGG GCGACCGCCA CGCTTCACGG CAGCGCTCGC GCCCTATTTC
GGCGGCCGGG TTCCGGCCTG A
 
Protein sequence
MGSHPNILVF DSGLGGLTVL REIVKARPDA HVTYAADDAF FPYGQHSEEA LVGRVVPLIG 
ELIDAHTPAL VVIACNTAST LVLSHLRAAY SVPFVGTVPA IKPACAASKT KRVSVLGTSG
TVKREYTRAL IRDFAGGCDV TLVGSAHLAA LAEAALGGAD VADEAIRAEI APCFVDADGS
RTDTIVLACT HYPLLLDRLM RLAPWPVDWI DPAPAIARRV VTLLGPGSGQ SDHQSDHPGA
EMVFTSGRPP RFTAALAPYF GGRVPA