Gene RPD_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1682 
SymbolflgA 
ID4022162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1897309 
End bp1898409 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content70% 
IMG OID637961876 
Productflagellar basal body P-ring biosynthesis protein FlgA 
Protein accessionYP_568819 
Protein GI91976160 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1261] Flagellar basal body P-ring biosynthesis protein 
TIGRFAM ID[TIGR03170] flagella basal body P-ring formation protein FlgA 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0494541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCT CACTCCTGAT CACCACGCTG CTCGCAGCGC CGCTCACCGC AACCGCGGCG 
GAGTCGACGC CGCCAGCCGC CGCGCCCGGC CTCGACCCAC GGATCGAGGA GGTGTTGCGC
ACACCGGTGC TGCGCTCTCA TGTCGAGGTG ACCGACGAGC TGGTGCGGAT CGGCGACGTC
ATCGACAACG CCGGCGGCGC GGCGCGGATC GCGATCTATC GTGCGCCCGA CCTCGGCACC
ACCGGCGCAC TGCCGACCGC ATCGGTGATC GCCGCGCTGC GTGCCCATCA GGTGATTGGC
GTCGACACCC GCGACATCCG CGAAGTCACC GTGACCCGCC TCGCCCGCAG CCTGCCGGCG
AAGCACATCC AGTTGCAGGT GATCGAAACG CTGCAGCGCC GCCACGGTTT CGGCGAAGCC
GAGGACGTCA CGTTGAGCTG GGACCGCGAG ATCGAAAGCC AGACCCTGCC TTCGAGCTAC
AGTGGCGCGC TGCAGCTCGT CGCCGAGCGG TTCGATCGAC GCAGCGGCCG GTTCGACATC
AGCTTCGAGA TCACGGGCGC CGCCGGCAAC GTACCGGTGC GGCTGCGCGT CACCGGCACG
GCGGTCGAGA CCTTGGCTAC GGTGGTGCTG ACCCGGCCGG TTGAACGCAA CGAGGTGATC
AAGATCTCCG ACGTCGCGAT CGAGCGGCGG CCCAAGGCCG AGGTCGCCTC CGATGCAATC
GCACGCGACG CCGTGATCGG CATGCAGGCG CGGCGCGCGC TGCGCAGCGG CCAGATCGTG
CGTAGCACCG ATCTCGCCAA GCCCGATCTG GTGACCCGCG ATCAGGGCGT GACGCTGATC
TATCAGGCCG CCGGCATCTA CCTGACGTCG CGCGGCAAGG CGCTGGAGAC CGGCACCGAG
GGCGACGTGG TGAACGTACT CAACCTGCAA TCCAAGCGCA CCGTGTCCGC GACCGTGGTC
GGCCGCGGCC AGGTCATGGT GACGGTCGCC GTGCCGCGCA TTCTCGCCAG CGCGCAGCCC
GCCACGGCGC CGAGCGTTCC CGCCGACACC GCCATCGCCC CAGCCGTCCC GGTCGCCCCC
GCCGCCGCCC GAACCGAGTA A
 
Protein sequence
MIRSLLITTL LAAPLTATAA ESTPPAAAPG LDPRIEEVLR TPVLRSHVEV TDELVRIGDV 
IDNAGGAARI AIYRAPDLGT TGALPTASVI AALRAHQVIG VDTRDIREVT VTRLARSLPA
KHIQLQVIET LQRRHGFGEA EDVTLSWDRE IESQTLPSSY SGALQLVAER FDRRSGRFDI
SFEITGAAGN VPVRLRVTGT AVETLATVVL TRPVERNEVI KISDVAIERR PKAEVASDAI
ARDAVIGMQA RRALRSGQIV RSTDLAKPDL VTRDQGVTLI YQAAGIYLTS RGKALETGTE
GDVVNVLNLQ SKRTVSATVV GRGQVMVTVA VPRILASAQP ATAPSVPADT AIAPAVPVAP
AAARTE