Gene RPD_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1645 
Symbol 
ID4022125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1852711 
End bp1853739 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content61% 
IMG OID637961840 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_568783 
Protein GI91976124 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.137571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG CGATCAAAAC CGATGTGCTG ATTGTTGGCG CGGGTCCGTG CGGACTGTTC 
GCCGTGTTCG AGCTGGGCCT TCTCGATATC AAGGTTCATC TCGTCGATAT TCTCGACAAG
GTCGGCGGCC AATGCGCCGA GCTGTATCCG GAAAAGCCGA TCTACGACAT TCCCGGCATT
CCGATGATCA CCGGCCACGG TCTGACCGAA AGCCTGATGG AGCAGATCAA GCCGTTCAAC
CCGACCATCC ATCTCAACGA GATGATCGAG AGCGTCGAGA AGATCGGCGA CCCGGAATTC
CGCGTCATCA CCAACGCCGG CACGGTGTTC GAATGCAAGG TGCTGGTCGT CGCTGCGGGC
GGCGGTTCGT TCCAGCCGAA GCGGCCGCCG GTGCCGGGCG TCGAGGCCTA TGAAGGCAAG
TCGGTGCACT ACGCGGTCCG CAAGATGGAA GAATTCCGCG GCAAGGACAT CGTCATCGTC
GGCGGCGGCG ACAGCGCGCT GGACTGGACG CTGAACCTCA ACCCGATCTG CAAGAGCATG
ACGCTGGTGC ATCGCCGCGA CGATTTCCGC GGCGCGCCGC ATAGCGTCGA GCAGATGCGC
CAGCTGGTGG CGTCGGGCAA GCTCGATCTC AAGATCGGCC AGATCACCGA ACTGCAGGGC
GACAACGGTC AGCTGTCCGG CGCGACGATC AAGCTCAACG ACAACAGCGT GGCGCAGATC
AAATGCGATG CGATGCTGCC GTTCTTCGGG CTGACGATGA AGCTCGGCCC GGTGGCGAAT
TGGGGCCTGC AGCTCGAGAA CAATCTGATC CCGGTCGACA CCGGCACGTT CGAGACCAAC
GTCCCCGGCA TCTTCGCGAT CGGCGACATC AACACCTATC CGGGCAAGCT GAAGCTGATC
CTGTCGGGCT TCCACGAGGG CGCGCTGATG GCGCAGAAGG CCGTCAAATA CGTCTATCCG
GACAAGCGCG TCGTGTTCCA GTACACCACG TCGTCGACCA ATCTGCAGAA GAAGCTCGGC
GTCAACTAA
 
Protein sequence
MTEAIKTDVL IVGAGPCGLF AVFELGLLDI KVHLVDILDK VGGQCAELYP EKPIYDIPGI 
PMITGHGLTE SLMEQIKPFN PTIHLNEMIE SVEKIGDPEF RVITNAGTVF ECKVLVVAAG
GGSFQPKRPP VPGVEAYEGK SVHYAVRKME EFRGKDIVIV GGGDSALDWT LNLNPICKSM
TLVHRRDDFR GAPHSVEQMR QLVASGKLDL KIGQITELQG DNGQLSGATI KLNDNSVAQI
KCDAMLPFFG LTMKLGPVAN WGLQLENNLI PVDTGTFETN VPGIFAIGDI NTYPGKLKLI
LSGFHEGALM AQKAVKYVYP DKRVVFQYTT SSTNLQKKLG VN