| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1628 |
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| Symbol | |
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| ID | 4022108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1826221 |
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| End bp | 1827021 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637961823 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_568766 |
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| Protein GI | 91976107 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.522982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATTC CGATCGCGCT GACGATCGCC GGGTCCGATT CCAGCGGTGG CGCAGGGATC
CAGGCCGACC TCAAATCGTT TGCCGCCAAC GGCGTCTACG GCGCCTCGGT GATCACGGCG
CTGACCGCGC AGAACACACT CGGCGTGAGC GCGATCCATT CGGTGCCGGC TGAGTTCGTC
ACCGCGCAGA TCGATTCGGT GTTCAGCGAT CTCGCGGTCG CCGCCGTCAA GATCGGGATG
GTCTCGCAGC GGCCGGTGAT CGAAGCCATC GTCGCCGGCC TCGACCGCTG GTCAGCCGCC
AACGTCGTGC TCGACCCGGT GATGGTCGCG ACCTCCGGCG ATCGCCTGAT CGCCGACGAT
TGCGTGGAAG CGCTGCGAAC CATGCTGATC CCCCGCGCGC GGATCATCAC TCCGAACCTG
CCCGAGGCGG CCGCGCTGCT GGACGAAGCG GTGGCGACCG ATCAGGCGGC GATCGAAAGC
CAGGGCCGTC GGCTGCTGGC GCTCGGCTGC GGTGCAGTGG TGATCAAGGG CGGCCACGGC
CACGGGCCGA CGAGCACCGA CTATTTGTTC AGCGAAGCCG GCACTTTGGT GCTGGTGGCG
CCGCGGATCG ACACCCGAAA CACCCACGGC ACCGGATGCT CGCTGTCCTC AGCGATCGCC
GCGCAACTCG CCAAGGGCGA GGATCTGGCG ACGGCGATCG GTCACGCCAA GGCTTGGGTC
AGCGAGGCGA TCGCCGCCGC CGATCGTCTC GAAGTCGGCA AAGGCCACGG TCCGATTCAT
CATTTCCACG CCTTCGACTA A
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| Protein sequence | MAIPIALTIA GSDSSGGAGI QADLKSFAAN GVYGASVITA LTAQNTLGVS AIHSVPAEFV
TAQIDSVFSD LAVAAVKIGM VSQRPVIEAI VAGLDRWSAA NVVLDPVMVA TSGDRLIADD
CVEALRTMLI PRARIITPNL PEAAALLDEA VATDQAAIES QGRRLLALGC GAVVIKGGHG
HGPTSTDYLF SEAGTLVLVA PRIDTRNTHG TGCSLSSAIA AQLAKGEDLA TAIGHAKAWV
SEAIAAADRL EVGKGHGPIH HFHAFD
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