Gene RPD_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1625 
Symbol 
ID4022105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1824321 
End bp1824770 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content60% 
IMG OID637961820 
Productcytochrome c, class II 
Protein accessionYP_568763 
Protein GI91976104 
COG category[C] Energy production and conversion 
COG ID[COG3909] Cytochrome c556 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.574438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGAA CAGTTGTAGT AGCCGGAGCC TTGTTGCTGA GCGTGAGCGC GGTGGTCGCG 
CAGCAGGATA TCGTCGACAA GACCCAGAAG CTGATGAAAG ACAACGGCCG CAACGCCATG
CTGCTGGGCG CGATGGCGAA GGGCGACAAG CCTTACGATC AGGCCGCGGT CGATGCGGCG
TTGAAGCAGT TCGACGAAAC CGCGAAGGAG CTGCCGAAGC TGTTTCCGGC CAGCGTTAAG
GGCCTGAAGG CGTTCGACAG CAAATACAGT TCGTCGCCGA AGATCTGGGA CGAGCGCGCC
AAGTTTGACG CCGAGATCGC GGATTTTGCC AAGGCCGTAA ACGCCGCGCA GGGCAAGATC
AAGGATGTCG ACACGCTGAA AGCGTCATTC CAGCCGATCG GCAAGCAGTG CGGCAGCTGC
CACGAAACCT TCCGTCTGAA GGACGGTTAG
 
Protein sequence
MLRTVVVAGA LLLSVSAVVA QQDIVDKTQK LMKDNGRNAM LLGAMAKGDK PYDQAAVDAA 
LKQFDETAKE LPKLFPASVK GLKAFDSKYS SSPKIWDERA KFDAEIADFA KAVNAAQGKI
KDVDTLKASF QPIGKQCGSC HETFRLKDG