Gene RPD_1596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1596 
Symbol 
ID4022076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1791427 
End bp1792623 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content66% 
IMG OID637961791 
ProductS-adenosylmethionine synthetase 
Protein accessionYP_568734 
Protein GI91976075 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0192] S-adenosylmethionine synthetase 
TIGRFAM ID[TIGR01034] S-adenosylmethionine synthetase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGT CTTACATGTT CACGAGTGAG TCGGTGTCGG AAGGACATCC GGACAAGGTC 
TGCGACCGGA TTTCCGACGA GGTCGTCGAT CTGTTCTTCC GCGAGGGACC GAAGGCGGGG
ATCAGCCCCT GGGCGATCCG CGCCGCCTGC GAGACGCTCG CAACGACTAA CAAGGTCGTC
ATCGCCGGCG AGACCCGCGG ACCGGCCTCG GTGACCAACG ACCAGATCGA GAGCGTCGTC
CGCGCCGCGA TCAAGGACAT CGGCTACGAG CAGGAAGGCT TCCACTGGGA GACCTGCGAC
ATCGAAATCC TGCTGCATCC GCAATCGGCG GACATCGCGC AGGGCGTCGA CGCGCTGCAG
CCGGGCACCA ATCAGGAAGA AGGCGCTGGC GACCAGGGCA TCATGTTCGG CTACGCCACC
AACGAGACCC CCGACCTGAT GCCGGCGCCG ATCTTCTATG CCCACAAGAT CCTGCGGCTG
ATCTCGGAAG CCCGACATTC CGGCAAGGAG AAGGTGCTGG GCCCGGACTC CAAGAGCCAG
GTCACCATCC AGTACGAGAA CGGCAAGCCG GTCGGCGTCC GCGAAATCGT GGTGTCGCAC
CAGCATCTGG TCGAGGACAT GACCTCGGCC CATGTCCGCG AGCGGGTCGA GCCCTATGTC
CGCCAGGCGC TGCCGGCCGA CTGGATCACC GACAAGACGA TCTGGCATAT CAACCCGACC
GGCAAGTTCT ACATCGGCGG CCCCGACGGC GACACCGGCC TGACCGGGCG CAAGATCATC
GTCGACACCT ATGGCGGCGC GGCCCCGCAT GGCGGCGGCG CGTTCTCGGG CAAGGATCCG
ACCAAGGTCG ACCGCTCGGC CGCCTACGCC TCGCGCTATC TCGCCAAGAA CATCGTCGCG
GCTGGTCTCG CCGACCGCTG CACCCTGCAG CTCGCTTACG CCATCGGCGT GGCGCGGCCG
CTGTCGATCT ACATCGACAC CCATGGAACC GGGAAGGTCT CGGAAGACAA GCTCGAGAAG
GCGGTCGCCG AGGCGATGGA CCTGACCCCG CGCGGCATCC GCACCCATCT CGACCTCAAC
AAGCCGATCT ACGCCCGGAC CTCGTCCTAC GGCCATTTCG GCCGCACGCC CGACGCCGAC
GGCGGCTTCT CCTGGGAGAA GACCGATCTT GCCGACGCCC TGAAGCGCGC GGTTTAA
 
Protein sequence
MRASYMFTSE SVSEGHPDKV CDRISDEVVD LFFREGPKAG ISPWAIRAAC ETLATTNKVV 
IAGETRGPAS VTNDQIESVV RAAIKDIGYE QEGFHWETCD IEILLHPQSA DIAQGVDALQ
PGTNQEEGAG DQGIMFGYAT NETPDLMPAP IFYAHKILRL ISEARHSGKE KVLGPDSKSQ
VTIQYENGKP VGVREIVVSH QHLVEDMTSA HVRERVEPYV RQALPADWIT DKTIWHINPT
GKFYIGGPDG DTGLTGRKII VDTYGGAAPH GGGAFSGKDP TKVDRSAAYA SRYLAKNIVA
AGLADRCTLQ LAYAIGVARP LSIYIDTHGT GKVSEDKLEK AVAEAMDLTP RGIRTHLDLN
KPIYARTSSY GHFGRTPDAD GGFSWEKTDL ADALKRAV