Gene RPD_1592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1592 
Symbol 
ID4022072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1786146 
End bp1787186 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content67% 
IMG OID637961787 
Productglycosyl transferase family protein 
Protein accessionYP_568730 
Protein GI91976071 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCAG CGCCAGAGAC CCGACGCCCG ATCCGCGGCG ATCTCGCGTC GATGGCGCAG 
GCGCTGCACG ATTTCGCCGA GCAAGAGTTT CCGCAAGCAG CCGCCCAGCC GCGCGTCGCG
GTGCTGGTGC CGTGCTTCAA CGAGGAAGCG GCGGTCGCGA CCGTGGTGGC GGATTTCCGC
CGCGTTCTGC CGGACGCCGC GATCTACGTC TACGACAACA ATTCGACCGA CCGCACCGCC
CAGGTCGCGC GCGAGGCCGG CGCCGAGGTG CGCCGCGAGC GGCGGCAGGG CAAGGGGCAG
GTGGTGCGGC GGATGTTCGC CGACATCGAC GCCGACGTCT ATCTGCTGGT CGACGGTGAC
GCCACCTACG ACGCCGCCAG CGCGCCGAAG ATGATCGCGG CGCTGATCGA CGAGCATCTC
GATATGGTGG TCGGATCGCG GATCGATCAG GCACGCGGCG CCTGGCGTCC CGGCCATCGC
ACCGGCAATC TGTTGCTGAC CGGGTTTCTC TCGGCGGTGT TCGGCCAGGC CTTCAAGGAT
ATCCTGTCCG GCTACCGGGT GTTCTCGCGC CGCTTCGTCA AGACCTTCCC AGTGCTGTCC
GACGGCTTCG AGATCGAGAC CGAGCTCAGC GTGCATGCGC TCGAACTGGC GATGCCGGTG
CGCGAGATCG AGACGCCGTA TTTCGAGCGG CCGCACGGTT CGTTCAGTAA GCTCAACACC
TGGCGCGACG GCTTCCGCAT TCTCGGCACC ATCCTGAAGC TGTATCGCTC GGAGAAGCCG
CTGCGGTTCT TCGGCTCGAT CTCGCTCGGC CTCGTGATGC TGTCGCTCGG CCTCGCGACG
CCGGTGATCG TGACCTATCT CGAAACCGGC CTGGTGCCGC GGCTACCGAC CGCGGTGCTG
TCGATGGGGC TGATGATCGT CGCGGTGCTG TCGGTTTCGT CCGGCCTTGT GCTCGACACC
GTGACGCGCG GACGCCGCGA GATGAAGCTG CTGGCCTATC TCGCGCATCC GGCGCTCGGC
GAGATGAGCC GCGACAGGTA G
 
Protein sequence
MAAAPETRRP IRGDLASMAQ ALHDFAEQEF PQAAAQPRVA VLVPCFNEEA AVATVVADFR 
RVLPDAAIYV YDNNSTDRTA QVAREAGAEV RRERRQGKGQ VVRRMFADID ADVYLLVDGD
ATYDAASAPK MIAALIDEHL DMVVGSRIDQ ARGAWRPGHR TGNLLLTGFL SAVFGQAFKD
ILSGYRVFSR RFVKTFPVLS DGFEIETELS VHALELAMPV REIETPYFER PHGSFSKLNT
WRDGFRILGT ILKLYRSEKP LRFFGSISLG LVMLSLGLAT PVIVTYLETG LVPRLPTAVL
SMGLMIVAVL SVSSGLVLDT VTRGRREMKL LAYLAHPALG EMSRDR