Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1566 |
Symbol | |
ID | 4022046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1757378 |
End bp | 1758658 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637961761 |
Product | putative branched-chain amino acid ABC transport system substrate-binding protein |
Protein accession | YP_568704 |
Protein GI | 91976045 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.293644 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.470298 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATGA AAACCCTACT GAGCACGGCG TCGCTGGCGC TCGTGATCGC AACCGTCTCG GCGACCGCGC AGGCGCAGAT CGCGATCGGG CATCTCGCCG ACTATTCGGG CGGCACCTCT GATGTCGGCA CGCCCTACGG CCAGGCCGTC GCCGACACCT TCGCATGGGT CAACAAGAAC GGCGGCGTCG CCGGCAAGCA GCTCAATGTC GACAGCAACG ACTACGGCTA CCAGGTGCCG CGCGCGATCG CGCTGTACAA GAAGTGGTCC GGCGGCGACA AAGTCGCAGC GATCATGGGC TGGGGCACTG CCGACACCGA AGCGCTGACC GGCTTCCTCG CCCAGGATAA AATCCCCGAC ATGTCCGGCT CCTACGCCGC CGCTTTGACC GATCCGGAAG GCACCAGCGG CAAGGCCAAG CCCGCCCCCT ACAACTTCTT CTACGGCCCG AGCTATTCCG ACGCGCTGCG CGCCGAGCTG ATGTGGGCGG CGGAGGACTG GAAGGCCAAG GGTAAGTCGG GCGCTCCGAA ATTCGTGCAT ATGGGCGCCA ACCATCCCTA CCCCAACGCG CCGAAGGCTG CAGGCGAAGC CCTCGCCAAG GAGCTCGGCT TCGAGGTGTT GCCGCCGCTG GTGTTCGCGC TGGCGCCGGG CGACTACAGC GCCCAGTGTC TGAGCCTGAA GAGCTCGGGC GCCAACTACG CCTATCTCGG CAACACCGCG GCCTCCAACA TCTCGGTGAT GAAGGCCTGC AAAGCGGCCG GGGTCGACGT GCAGTTCATG AGCAACGTGT GGGGCATGGA CGAGAACGCC GCCAAGACCG CCGGCGACGC CGCCGATGGC GTGATCTTCC CGCTGCGCAC CGCGGTCGCC TGGGGCGGCA ATGCGCCCGG CATGAAGACT GTCGAGGAAG TCTCCAAGAT CTCCGACTCG ACCGGCAACG TCTATCGTCC GGTGCATTAC GTCGCGGCGG TGTGCTCCGC GCTGTACATG AAGGAGGCGA TCGAATGGGC CGCCAAGAAC GGCGGCGCCA CCGGCGAGAA CGTCGCCAAG GGCTTCTACC AGAAGAAGGA TTGGGTGCCG GCCGGCATGG ACGGCGTCTG CAATCCCTCG ACCTGGACCG ACAAGGACCA CCGCGGAACG ATGAAGGTCG ACCTGTATCG GTCGAAAGTG ACGGGACCGA CCGATGGCGA CATCAAGGAC CTGATCGCCA AGGGCACGAT CAAGCTCGAG AAGGTCAAGA CCGTCGACCT GCCGCGCAAG CCGGAATGGT TCGGCTGGTG A
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Protein sequence | MTMKTLLSTA SLALVIATVS ATAQAQIAIG HLADYSGGTS DVGTPYGQAV ADTFAWVNKN GGVAGKQLNV DSNDYGYQVP RAIALYKKWS GGDKVAAIMG WGTADTEALT GFLAQDKIPD MSGSYAAALT DPEGTSGKAK PAPYNFFYGP SYSDALRAEL MWAAEDWKAK GKSGAPKFVH MGANHPYPNA PKAAGEALAK ELGFEVLPPL VFALAPGDYS AQCLSLKSSG ANYAYLGNTA ASNISVMKAC KAAGVDVQFM SNVWGMDENA AKTAGDAADG VIFPLRTAVA WGGNAPGMKT VEEVSKISDS TGNVYRPVHY VAAVCSALYM KEAIEWAAKN GGATGENVAK GFYQKKDWVP AGMDGVCNPS TWTDKDHRGT MKVDLYRSKV TGPTDGDIKD LIAKGTIKLE KVKTVDLPRK PEWFGW
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