Gene RPD_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1530 
Symbol 
ID4022010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1705904 
End bp1706440 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content65% 
IMG OID637961725 
Productrubrerythrin 
Protein accessionYP_568668 
Protein GI91976009 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.88672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGG TCCAGCAGCA CGACCAGATT CCGAGCTTCG ACAGCGTCGC GGAGTTCTTT 
GCCCAGGCCC TCGCGATCGA GGTGGAAGCA GCCGAACGCT ACACGCTGCT TGCAGACCAG
ATGGAGGTGC ATAACAACCG CGAGATCGCC GAGATCTTCC GCAAGATGGC AGCGATCGAA
TCCGAGCATC GCGACGAGGT GGCGCGCCGC GCCAGCGATG CGCTGGTCGC CGGCCGGCCG
GCGAATTTCA GTTGGACCGC CCCGGACGGC CCCGAAACCA CCGAGCTCGA GCAACTGCAT
TATTTGATGA CGCCGCGCCA GGCGCTGATG CTGGCGCGTC ACAATGAGGA GCGTGCGGTC
AGCTATTTTG AAGCGATCGC CGCGACCGCA ACCGATCCGG CGATTGCCGG CTTCGCCAGG
GAGATGGCCG AGGAGGAACG CCAGCACGTC GCCTGGGTCG ACCAGTGGCT GCTGAAATTC
CCCGCCGACG AGCCGGGCTG GGACGAAGAC CCCGATCCGC CGCTGTATTC GGAATGA
 
Protein sequence
MSQVQQHDQI PSFDSVAEFF AQALAIEVEA AERYTLLADQ MEVHNNREIA EIFRKMAAIE 
SEHRDEVARR ASDALVAGRP ANFSWTAPDG PETTELEQLH YLMTPRQALM LARHNEERAV
SYFEAIAATA TDPAIAGFAR EMAEEERQHV AWVDQWLLKF PADEPGWDED PDPPLYSE