Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1521 |
Symbol | |
ID | 4022001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1696295 |
End bp | 1697233 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637961716 |
Product | phenylacetic acid degradation operon negative regulatory protein PaaX |
Protein accession | YP_568659 |
Protein GI | 91976000 |
COG category | [K] Transcription |
COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
TIGRFAM ID | [TIGR02277] phenylacetic acid degradation operon negative regulatory protein PaaX |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAATC GCGTCTTGAG CCAGTGGATC GCAAAGCAAC TGGCTGATCG CCCGTTGCGG GCGAACTCCC TGATCATCAC GATCTATGGC GACATGATTG CGCCGCTCGG CGGCACGGTG TGGCTCGGCG GCTTCATCCG GCTTGTGGAG CCGCTCGGAC TCAACGCACG CGCGGTGCGC ACGTCAGTCT TTCGCCTGTC GCGCGAAAAA TGGCTGGTCT CCGAGCAGAT CGGGCGGCGT AGTTACTACA GCCTGACCGC GACAGGCCGC CGCCGCTTCG AACTTGCCTT CCGCCGAATC TACGAAGATG CGAGCATTTC CTGGGCCGGC GATTGGCAAG TGGTGTTGAC GCCGGGCGAC AGTCTGACGC CGGCGCTGCG CAAGGAGCTG CTGTGGGCGG GCTATGCCGC TATTGCGCCG GGCGCTCTCG CTCATCCATC GGCGCAGACC GATGCATTGC TGGACATCCT GCAGAATGCC GGTGCGCACG ACAAGGTCGT GGTGCTGCAG GCACGGACCC TCGGCGCGTT GTCCAGCCGA CCGATCAAGG AATTGGTCGA CCAATGCTGG AATCTGGGCA AGGTCGCAGG CGAGTATCAG AGCTTTATCG ATCGCTTTCG CAGCGTCGCG CGAGCGCTGC GCAGTACGTC GAATCTCGAC CCGGAACAGT GCTTCATCAT CCGCACCCTG CTGATGCACG AGTTTCGCCG CGTGCAATTG CGCGACCCTT CTTTGCCACG GCAATTGCTG CCGGACGATT GGCCCGGCGA CAAGGCACGA GTGATGTGCC GGGATATCTA CCGACTCTGC TGGGTGAAGA CCGAAGAGCA TCTGATGCAG ATGCTGGAGA CGTCGGATGG GCCATTGCCA CCGGCGGAGA AGAGTTTCCA TGCGCGGTTC GGCGGCGTGA TCGACGAAGA GGCCGAACAG CGATCCTAG
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Protein sequence | MKNRVLSQWI AKQLADRPLR ANSLIITIYG DMIAPLGGTV WLGGFIRLVE PLGLNARAVR TSVFRLSREK WLVSEQIGRR SYYSLTATGR RRFELAFRRI YEDASISWAG DWQVVLTPGD SLTPALRKEL LWAGYAAIAP GALAHPSAQT DALLDILQNA GAHDKVVVLQ ARTLGALSSR PIKELVDQCW NLGKVAGEYQ SFIDRFRSVA RALRSTSNLD PEQCFIIRTL LMHEFRRVQL RDPSLPRQLL PDDWPGDKAR VMCRDIYRLC WVKTEEHLMQ MLETSDGPLP PAEKSFHARF GGVIDEEAEQ RS
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